read-alignments

There are 2 repositories under read-alignments topic.

  • Mangul-Lab-USC/review-technology-dictates-algorithms

    A systematic survey of algorithmic foundations and methodologies across 107 alignment methods (1988-2021), for both short and long reads. We provide a rigorous experimental evaluation of 11 read aligners to demonstrate the effect of these underlying algorithms on speed and efficiency of read alignment. Described by Alser et al. at https://arxiv.org/abs/2003.00110.

    Language:Jupyter Notebook7403

  • svkazakov/ra-visualizer

    Genome read alignments visualizer

    Language:Python2100