ribo-seq

There are 9 repositories under ribo-seq topic.

smithlabcode/ribotricer
A tool for accurately detecting actively translating ORFs from Ribo-seq data
Language:Python31 5 558
comprna/ORQAS
ORF Quantification pipeline for Alternative Splicing
Language:Python15 5 36
sunyumail93/PipeRiboseq
A comprehensive pipeline for Ribo-seq data analysis
Language:Shell10 2 12
TRISTAN-ORF/RiboTIE
Scripts and instructions to apply RiboTIE on Ribo-seq data
10 3 90
lcalviell/Ribo-seQC
A comprehensive analysis tool for Ribo-seq and small RNA-seq data
Language:HTML9 1 55
Asplund-Samuelsson/ribopipe
RNA-Seq and Ribo-Seq (ribosome profiling) data workup pipelines
Language:R2 1 02
TRISTAN-ORF/RiboTIE_article
Scripts run to produce the RIBO-former paper
Language:Shell2 1 20
lcscs12345/riboss
Comparison of the ability of open reading frames to recruit ribosomes within individual transcripts
Language:Jupyter Notebook0 2 00
zhongyiwang1/Ribo-seq
Pipeline and scripts for the comparative analysis of ribosome profiling and matched RNA sequencing data between organs and across species.
Language:R0 1 01