scientific-workflows
There are 68 repositories under scientific-workflows topic.
scipipe/scipipe
Robust, flexible and resource-efficient pipelines using Go and the commandline
JunoLab/Weave.jl
Scientific reports/literate programming for Julia
showyourwork/showyourwork
A workflow for reproducible and open scientific articles
pharmbio/sciluigi
A light-weight wrapper library around Spotify's Luigi workflow library to make writing scientific workflows more fluent, flexible and modular
pytask-dev/pytask
pytask is a workflow management system that facilitates reproducible data analyses.
KAUST-Academy/python-data-science-project
Template repository for a Python 3-based (data) science project
SCM-NV/qmflows
This library tackles the construction and efficient execution of computational chemistry workflows
Spinmob/spinmob
Rapid and flexible acquisition, analysis, fitting, and plotting in Python. Designed for scientific laboratories.
steep-wms/steep
⤴️ Steep Workflow Management System – Run scientific workflows in the Cloud
wrench-project/wrench
WRENCH: Cyberinfrastructure Simulation Workbench
wfcommons/WfCommons
WfCommons: A Framework for Enabling Scientific Workflow Research and Development
tferr/Scripts
:microscope::cocktail: Home of the ImageJ BAR: A collection of Broadly Applicable Routines for ImageJ
KAUST-Academy/pytorch-gpu-data-science-project
Template repository for a Python 3-based (data) science project with GPU acceleration using the PyTorch ecosystem.
nlesc-nano/CAT
A collection of tools designed for the automatic construction, and subsequent analysis, of chemical compounds.
GEUS-Glaciology-and-Climate/freshwater
Greenland liquid water runoff from 1958 through 2019
wfcommons/pegasus-instances
Collection of workflow execution instances for the Pegasus workflow management system.
KAUST-Academy/tensorflow-gpu-data-science-project
Template repository for a Python 3-based (data) science project with GPU acceleration using the TensorFlow ecosystem.
SCM-NV/nano-qmflows
Package containing several workflows to compute molecular properties for nanomaterials
bentsherman/tesseract
A tool for creating resource prediction models for scientific workflows
h4sci/h4sci-book
Hacking for Social Sciences and the Humanities - Bookdown online book
KAUST-Academy/nvidia-rapids-data-science-project
Template repository for a Python 3-based (data) science project with GPU acceleration using NVIDIA RAPIDS libraries.
TheRoddyWMS/Roddy
The Roddy workflow development and management system.
jaidevd/kepler
Smart journal for ML experiments.
pegasus-isi/1000genome-workflow
Bioinformatics workflow that identifies mutational overlaps using data from the 1000 genomes project
djorlando24/pySciCam
Read images from high speed and scientific cameras in Python
CIDARLAB/fpSelection
Algorithms for the selection of fluorescent reporters.
KAUST-Academy/python-gpu-data-science-project
Template repository for a Python 3-based (data) science project with GPU acceleration
KAUST-Academy/sklearn-data-science-project
Template repository for a Python 3-based (data) science project using the scikit-learn ecosystem.
vacoa/explore
Scientific Workflow Management Tool
wfcommons/WfFormat
The WfCommons JSON Schema for workflow instances and generators
wrench-project/pegasus
A WRENCH implementation of the Pegasus WMS
chamibuddhika/kisseru
Script your pipelines...
myyoda/template
Template for YODA's organigram on data analysis
EarthNLP/ClimateScholar
ClimateScholar is a scientific discovery search engine & knowledge graph to help researchers in combatting the climate crisis.
lucasaugustomcc/tacc-workflows
Workflows created on WINGS workflow system for the Hydrology domain
robinweide/tagmeppr
A computational pipeline to map tagmap-insertions