sequence-motif

There are 7 repositories under sequence-motif topic.

  • althonos/lightmotif

    A lightweight platform-accelerated library for biological motif scanning using position weight matrices.

    Language:Rust38422

  • kkdey/Logolas

    R package for Enrichment Depletion Logos (EDLogos) and String Logos

    Language:R274231

  • ibn-salem/sevenC

    7C: Computational Chromosome Conformation Capture by Correlation of ChIP-seq at CTCF motifs

    Language:R12312

  • althonos/pymemesuite

    Cython bindings and Python interface to the MEME suite, a collection of tools for the analysis of sequence motifs.

    Language:Cython1021

  • AdeBC/motif-finding-algorithms

    Implementation of three algorithms to solve the motif finding problem.

    Language:Python2300

  • shuzhenkuang/DeepLncCTCF

    DeepLncCTCF for identification and analysis of consensus RNA motifs binding to the genome regulator CTCF

    Language:Python1100

  • naturale0/MotifOccur

    calculates probability of k-mer motif occurrence in n ntd random sequence

    Language:Python10