shape-analysis

There are 72 repositories under shape-analysis topic.

  • 2D_shapespace

    Language:Jupyter Notebook2

  • libbwabstraction

    Code for the paper "Scale-aware Black-and-White Abstraction of 3D Shapes" in SIGGRAPH 2018.

    Language:C++5

  • churn-prediction

    Análise e previsão de churn de uma empresa do ramo de telecomunicações.

    Language:Jupyter Notebook4

  • ITKShape

    ITK-Based Shape Analysis Filters (e.g Procrustes Alignment for Meshes)

    Language:C++4

  • Partial_shape_matching

    This is an implementation of Eurographics 2017 paper 'Fully spectral partial shape matching' using Tensorflow and Pymanopt.

    Language:Python4

  • Planar-Elastic-Metrics

    Code for matching curves with Elastic Metrics

    Language:MATLAB4

  • TDA

    Randomness of Shapes and Statistical Inference on Shapes via the Smooth Euler Characteristic Transform

    Language:R2

  • Mask2Lesion

    Code corresponding to our MICCAI SASHIMI 2019 paper on shape-constrained skin lesion image synthesis.

    2

  • WassersteinFisherRaoDistance

    An optimization method for computing the unbalanced Wasserstein-Fisher-Rao optimal transport distance between two measures on S^2. Includes an application to computing the SRNF shape distance and color tranfer.

    Language:Jupyter Notebook2

  • SAFARI

    Shape Analysis for AI-Reconstructed Images

    Language:R2

  • Var_LDDMM

    MATLAB implementation of varifold LDDMM framework.

    Language:MATLAB2

  • output-shape

    A very lightweight and minimalistic output shape examiner of layers and models.

    Language:Python1

  • NHST-SECT

    Hypothesis testing for topological data analysis via the smooth Euler characteristic transform

    Language:R1

  • Bubble_shape_analysis

    A Wolfram Mathematica code developed for bubble shape analysis. Co-developed with https://github.com/Peteris-Zvejnieks.

    Language:Mathematica1

  • BACON

    Bayesian Clustering of n-gons via a Double Dirichlet Mixture Model

    Language:R1

  • SlicerPoissonShapeAnalysis

    Statistical Shape Analysis using 3D Poisson Equation---A Quantitatively Validated Approach

    Language:C++1

  • SlicerDWD

    3D Slicer extension for Shape Analysis with DWD (Distance Weighted Discrimination)

    Language:Python1

  • Mesh_Neural_Network

    SOC project

    Language:Python1

  • polygon-triangulation-tool

    A simple tool to analyze polygons and fill them with triangles based on a set of parameters.

    Language:JavaScript1

  • ElasticPath2Path

    Morphological categorization of neurons in order to explore their functional features has drawn significant attention over past few decades. The enormous complexity in the structure of neurons poses a real challenge in the identification and analysis of similar and dissimilar neuronal cells. Existing methodologies often carry out strutural and geometrical simplifications, which substantially changes the morphological statistics. Using digitally-reconstructed neurons, we extend the work of Path2Path as ElasticP2P, which seamlessly integrates the graph-theoretic and differential-geometric frameworks. By decomposing a neuron into a set of paths, we derive graph metrics, which are path concurrence and path hierarchy. Next, we model each path as an elastic string to compute the geodesic distance between the paths of a pair of neurons. Later, we formulate the problem of finding the distance between two neurons as a path assignment problem with a cost function combining the graph metrics and the geodesic deformation of paths.

    Language:MATLAB1

  • shadow

    Shadow Image Recognizer

    Language:C++1

  • pyshapes

    Some python shape matching methods

    Language:Shell1

  • Julia

    Julia: Fractal Image Data Generator

    Language:R1

  • hippo_morph_old

    The old, outdated code for my hippocampal morphometry pipeline.

    Language:Shell

  • hippo_morph

    Current code for my hippocampal morphometry workflow, based on the hippodeep_pytorch segmentation program and the SlicerSALT shape analysis software.

    Language:Python

  • ERT

    A Matlab implementation accompanying the paper "Statistical Inference on Grayscale Images via the Euler-Radon Transform".

    Language:MATLAB

  • BayesLASA

    Bayesian Landmark-based Shape Analysis

    Language:R

  • Shape_Analysis

    This project is related to shape analysis in MATLAB and has the ability to transfer to GNU Octave.

    Language:MATLAB

  • shape-analysis

    These source code was developed to be part of the Digital Image Processing Course

    Language:MATLAB

  • SINATRA_AoAS_Results

    Reproducibility repo for the simulation and real data results in the SINATRA manuscript set to appear in AoAS.

    Language:HTML

  • ddg-exercises-js

    CS 15-458/858: Discrete Differential Geometry

    Language:JavaScript

  • cucurbitaceae-morpholeaf

    Cucurbitaceae Leaves Morphometric Data and Code

    Language:R

  • shapeanalysis-seminar

    Presentations and a report on Isospectralization, or how to hear shape, style, and correspondence.

    Language:TeX

  • VLSM

    Vector-based Landscape Metrics

    Language:R

  • SRSFN

    SRSF framework for nucleosome positioning analysis

    Language:PostScript

  • SRSFseq

    SRSF shape analysis framework for sequencing data

    Language:R