species-identification
There are 27 repositories under species-identification topic.
mcguirepr89/BirdNET-system
BirdNET as a systemd service with other features.
mmpust/raspir
Raspir, the rare species identifier
EricArcher/banter
banter is a package for creating hierarchical acoustic event classifiers out of multiple call type detectors.
Changwanseo/FunVIP
Fungal Identification Pipeline
RhettRautsaw/MitoSIS
MitoSIS (Mitochondrial Species Identification System) is a wrapper for mitochondrial genome assembly and identification of sample contamination or mislabeling.
mariamkhmahran/bird-classifier-model
This repository contains code for preprocessing, training, evaluation, and inferencing of two models, SSD and Faster R-CNN, for the task of bird detection and classification. For details about the Flask web application built on this model visit the link below.
mikkoim/taxonomist
Image classification pipeline for natural sciences
raymondkiu/bactspeciesID
Fast microbial species identification (16S rRNA gene-based approach) and contamination check using whole genome assemblies
MfN-Berlin/naturblick-ios
Naturblick iOS
EibSReM/MicrosoftSpeciesClassification
Running inference on images to detect the species of animals and plants with the Microsoft AI for Earth Species Recognition Model
hassanakthv/SIPMS
Species Identification and Prediction by Mass Spectrometry
kokinide/PARSID
Parser of BLAST results
mariamkhmahran/bird-classifier-ui
A Flask web application for the classification of bird species built using TFServing, Docker and MySQL.
mdcjansen/DBA
DNA barcoding analysis pipeline
NataliaKudr/SpeciesIdentification
Species identification based on mass spectrometry biomarker clustering
pg-space/panspace
Embedding-based indexing for compact storage, rapid querying, and curation of bacterial pan-genomes
Scott-Coates-Org/solo-project-adi-lux
A website that aims to increase awareness of invasive species and the locations they are found. Also distinguishes invasive species from regular animals.
wildlifeai/wai_data_tools
Tools for manipulating the Wildlife Watcher, a smart camera to monitor animals in the wild.
bitdessin/dragonfly
Species identification model for Japanese dragonflies and damselflies
damaniayash/dragonfly-species-identification
Identify Dragonfly Species using data mined from Facebook dragonfly SouthAsia Group.
EibSReM/iNaturalist_Competition
Running inference on images to detect the species of animals and plants with a image-recognition model trained on the iNaturalist 2021 Competition
FalsoMoralista/ViT-MAE-PlantCLEF2022
Image-based plant identification at global scale.
JuliianaLeshchenko/Sarcoscypha
created to work on with data for the article
sergio2447/Tick-determination
A snakemake pipeline for tick determination from ONT whole genome sequencing samples.
peterbat1/processALA
R package to give easy access to ALA plant occurrence data
Public-Health-Bioinformatics/irida-plugin-species-abundance
Estimate the relative abundance of sequence reads originating from different species in a sample using the IRIDA system
willkuhn/towd
Exploring the evolutionary history of dragonflies and damselflies (Odonata) from their wings!