stochastic-simulations
There are 13 repositories under stochastic-simulations topic.
SciML/FiniteStateProjection.jl
Finite State Projection algorithms for chemical reaction networks
quantumbrake/cayenne
Python package for stochastic simulations
achattaraj/Ksp_phase_separation
Tools for data generation and data analysis for the eLife research article - "The solubility product extends the buffering concept to heterotypic biomolecular condensates"
mcavallaro/gLoop
Software supporting M. Cavallaro, et al., 3′-5′ crosstalk contributes to transcriptional bursting. Genome Biol 22, 56 (2021). https://doi.org/10.1186/s13059-020-02227-5
Gdemaude/ASFVModel
Numba accelerated and multiprocess simulation of propagation of the African Swine Fever Virus
lillux/gillespie_ssa
Implementation of Gillespie Stochastic Simulation Algorithm
marcoxa/Jillespie
A Julia implementation of Gillespie's algorithm(s).
mauricelanghinrichs/StatsInferenceTutorial
Tutorial for Statistical Inference with Julia.
rafael-a-monteiro-math/Stochastic-Simulations
A glimpse of some stochastic simulation methods. I don't claim originality for the results posted here: these are mostly some quick experiments I did while doing research.
rouzbeh/Modigliani
Modigliani is a stochastic simulation framework for neuroscientists
WalterNadalin/Reaction-DiffusionProcesses
An implementation of a pratical guide to stochastic simulations of reaction-diffusion processes
AdrianGuel/StochasticProcesses
Simulation and kernel density estimation of linear and non-linear stochastic systems. Some codes include the computation of the information rate, KL-divergence and information length.