suffixarray
There are 18 repositories under suffixarray topic.
williamfiset/DEPRECATED-data-structures
A collection of powerful data structures
seqan/seqan
SeqAn's official repository.
IlyaGrebnov/libsais
The libsais library provides fast linear-time construction of suffix array (SA), generalized suffix array (GSA), longest common prefix (LCP) array, permuted LCP (PLCP) array, Burrows-Wheeler transform (BWT) and inverse BWT based on the induced sorting algorithm with optional OpenMP support for multi-core parallel construction.
xxsds/sdsl-lite
Succinct Data Structure Library 3.0
emmanuel-marty/lz4ultra
Optimal LZ4 compressor, that produces files that decompress faster while keeping the best compression ratio
IlyaGrebnov/libcubwt
libcubwt is a library for GPU accelerated suffix array and burrows wheeler transform construction.
Tascate/Suffix-Arrays-in-CPP
C++ Implementations of Suffix Array Constructions Algorithms for SA-IS and Skew as well as Kasai's algorithm for LCP construction.
d-tsuji/suffixarray
Manber&Myers's Suffix Array implemented in Go.
zamgi/SuffixArray
Implementation of suffix array
akamiru/sort
three-pivot quicksort + novel linear time suffix array construction algorithm
aminul-islam-niloy/Suffix-Array
suffix Array implementation using c++
cornerCao/LCS
Get the LCS for several strings (more than 2) using suffix array and stack
lars76/pysais-utf8
Python C module for creating suffix, LCP and BWT arrays with UTF-8 text.
sjanarth/dsutils
A set of data structures utility classes
IBCHgenomic/suffix-arrays
rust suffix arrays