tree-sequences

There are 7 repositories under tree-sequences topic.

tskit-dev/tskit
Population-scale genomics
Language:Python153 12 1.2k72
molpopgen/fwdpy11
Forward-time simulation in Python using fwdpp
Language:C++30 3 4306
tskit-dev/tskit-rust
Rust bindings for the tskit library
Language:C15 2 1413
tskit-dev/tstrait
Quantitative trait simulation for ARGs
Language:Python6 7 596
ForwardSimulation/forrustts
Forward time simulation, rust, and tree sequences.
Language:Rust3 2 640
bguo068/tskibd
Calculate IBD segments from tree sequence using tskit C API
Language:C++1 1 50
szhan/tsimpute
Genome-wide genotype imputation using tree sequences.
Language:Jupyter Notebook0 2 260