tsslab

There are 4 repositories under tsslab topic.

  • dgavr/Single_Cell_Iterative_Pooling

    Iteratively randomly pooling scRNA-seq expressing a given gene from different numbers of cells and running DESeq2 with fdrtools correction to determine how many times which genes come out as enriched with said gene

    Language:Python1000

  • dgavr/biotagging

    Python scripts necessary to reproduce ATAC-seq and RNA-seq analysis in Biotagging manuscript

    Language:Perl0001

  • dgavr/Useful_small_scripts_for_DESeq2

    Some useful scripts useful for parsing or writing DESeq2 Scripts

    Language:Python0000

  • dgavr/Zebrafish_mappability

    Different approaches to calculate mappability and GC-rich tracks for danio rerio genomes

    Language:Python0010