untargeted-metabolomics
There are 15 repositories under untargeted-metabolomics topic.
computational-metabolomics/dimspy
Python package for processing direct-infusion mass spectrometry-based metabolomics and lipidomics data
idslme/IDSL_MINT
A Deep Learning Framework to Interpret Raw Mass Spectrometry (m/z) Data
idslme/IDSL.IPA
Intrinsic Peak Analysis (IPA) pipeline for peak-picking in large-scale untargeted small molecule analysis including metabolomics, lipidomics, exposomics, and environmental studies.
jcapelladesto/geoRge
geoRge: a computational tool for stable isotope labelling detection in LC/MS-based untargeted metabolomics
LizzyParkerPannell/Untargeted_metabolomics_workflow
Collaborative workflow for untargeted metabolomics data processing and analysis using open-source tools. https://doi.org/10.3390/metabo13040463
Yaser218/Untargeted-Metabolomics-Clustering
VOCCluster: Untargeted Metabolomics Feature Clustering Approach for Clinical Breath Gas Chromatography - Mass Spectrometry Data
UMCUGenetics/dIEM
For untargeted metabolomics, this tool calculates probability scores for metabolic disorders. In addition, it provides visual support with violin plots of the mass spectrometry (DI-HRMS) measurements for the lab specialists.
Christ14n97/MSc_Untarg_Metabo_Workflow
My MSc thesis focused on the improvement of metabolite biomarkers annotation. The resulting workflow combined common unsupervised-supervised ML models with graph-based analysis of metabolic reconstructions.
JoseRaulBS/HighResMS
High Resolution Software for Mass Spectrometry
Lacterd/HeuSMA
A Heuristic Strategy for Metabolomics Analysis based on multiple chromatographic gradients to enhance metabolite coverage in untargeted metabolomics analysis.
CeMOS-Mannheim/M2ara
M²ara, a R shiny web app for feature selection in cell-based assays.
CeMOS-Mannheim/MALDIcellassay
Detects high variance signals and generates dose-response curves to futher investigate candidate signals.
Ramtin92/PUMA
Pathway Activity Analysis and Metabolite Annotation for Untargeted Metabolomics using Probabilistic Modeling