vcf-format

There are 8 repositories under vcf-format topic.

edgardomortiz/vcf2phylip
Convert SNPs in VCF format to PHYLIP, NEXUS, binary NEXUS, or FASTA alignments for phylogenetic analysis
Language:Python284 9 4684
davetang/learning_vcf_file
Learning the Variant Call Format
Language:Perl137 10 240
biocpp/biocpp-io
BioC++ Input/Output library
Language:C++8 5 55
endreth/jVCFparser
A command-line parser for VCF files designed for population genetics analyses.
Language:Java1 1 00
M-Osky/VCFixer
Checks vcf files and removes loci and samples with too many missings, can also input genotypes in missing (various options for this).
Language:Perl1 1 00
pughlab/cbio_import_utils
Language:Python1 5 01
zjwinn/KlusterCaller-to-VCF
Modify KASP assay calls to a VCF format
Language:Shell0 1 00
bdolmo/vcf2json
Convert an standard VCF to JSON format
Language:Python2 02