vessel-segmentation
There are 37 repositories under vessel-segmentation topic.
open-mmlab/mmsegmentation
OpenMMLab Semantic Segmentation Toolbox and Benchmark.
SharifAmit/RVGAN
[MICCAI'21] [Tensorflow] Retinal Vessel Segmentation using a Novel Multi-scale Generative Adversarial Network
sraashis/deepdyn
pytorch implementation of paper https://www.frontiersin.org/articles/10.3389/fcomp.2020.00035/full
InsightSoftwareConsortium/ITKTubeTK
TubeTK is an open-source toolkit for the segmentation, registration, and analysis of tubes and surfaces in images, developed by Kitware, Inc.
RUB-Bioinf/VesselExpress
🔬🖥 Automated Blood Vasculature Analysis of 3D Light-Sheet Image Volumes
moucheng2017/EMSSL
[MICCAI 2022 Best Paper Finalist] Bayesian Pseudo Labels: Expectation Maximization for Robust and Efficient Semi Supervised Segmentation
DakaiZhou/Vessel-Segmentation-MR-Registration
The code in this repository is from my master thesis. This project aims to automatically segment carotid from 3D MR brain image, and use the segmented carotid to extract Time-Activity-Curve from PET images. It mainly involves 3D image coregistration, vessel segmentation, partial valume correction.
sraashis/retinal-fundus-transfer
An example of easytorch implementation on retinal vessel segmentation.
TY-Shi/AFN
Affinity Feature Strengthening for Accurate, Complete and Robust Vessel Segmentation(JBHI)
JiajieMo/OctaveUNet
Applying Octave UNet for Retinal Vessel Segmentation.
Binjie-Qin/SVS-net
Sequential vessel segmentation via deep channel attention network
Sohambasu07/DR_2021
Diabetic Retinopathy Feature Extraction and Binary Diagnosis
djin31/VesselExtract
U-net based CNN for segmenting blood vessel and thereafter removal of vessels from fundus image
uw-biomedical-ml/oir
OIR Segmentation
visionlyx/HP-VSP
A high-performance deep-learning-based pipeline for whole-brain vasculature segmentation at the capillary resolution
jzsherlock4869/pytorch-unet-for-retina-vessel-segmentation
a simple and easy to follow pytorch implementation of U-net for retina vessel segmentation
Binjie-Qin/RPCA-UNet
Robust PCA Unrolling Network for Super-resolution Vessel Extraction in X-ray Coronary Angiography
YueCui-Labs/FFCM-MRF
MATLAB GUIs for ToF-MRA data preprocessing, cerebrovascular segmentation and quantification
psweens/Vascular-TDA
Software to analyse the topology of vascular networks.
xslidi/BSEResU-Net
[CMPB] Official implementation of "BSEResU-Net: An attention-based before-activation residual U-Net for retinal vessel segmentation"
eneSadi/Exploring-The-Limits-Of-Data-Augmentation-For-Retinal-Vessel-Segmentation
Code for our paper "Exploring The Limits Of Data Augmentation For Retinal Vessel Segmentation". https://arxiv.org/abs/2105.09365
phkhanhtrinh23/vessel_segmentation
MultiResDenseUNet (SVOISP-2021-KH&KTMT-125) - Winner (3rd Prize) of The 10th Science and Technology Symposium for OISP Students. Ho Chi Minh City University Of Technology, Vietnam.
aiporre/gcn_segmentation
Stroke-GFCN: segmentation of Ischemic brain lesions
R-Vessel-X/SlicerRVXVesselnessFilters
3D Slicer Vesselness Filters CLI Extension
kjanjua26/CHIPathy
Diabetic Retinopathy using Patch Networks.
kartikprabhu20/DS6
DS6: Deformation-aware learning for small vesselsegmentation with small, imperfectly labeled dataset
sfu-mial/TreeDiffusion
Official Code for "Representing Anatomical Trees by Denoising Diffusion of Implicit Neural Fields"
sinAshish/TreeDiffusion
Representing Anatomical Trees by Denoising Diffusion of Implicit Neural Fields
TommyGiak/retinal_vessel_segmentation
Retinal's vessel segmentation with deep U-Net
h39s/VessCoopJ
ImageJ Plugin for Automated Cancer Cell Vessel Co-option Analysis
maulanaakbardj/Retinal_eye_vessel_segmentation
retinal eye vessel segmentation with MATLAB
Wafama/Image-Analysis
Preprocessing images