virulence-factor

There are 6 repositories under virulence-factor topic.

  • fmalmeida/bacannot

    Generic but comprehensive pipeline for prokaryotic genome annotation and interrogation with interactive reports and shiny app.

    Language:Nextflow984709

  • beiko-lab/arete

    AMR/VF LGT focused bacterial genomics analysis workflow

    Language:Python212754

  • lmc297/BTyper3

    In silico taxonomic classification of Bacillus cereus group genomes using whole-genome sequencing data

    Language:Python17460

  • aleimba/ecoli_VF_collection

    Collection of 1069 Escherichia coli virulence factors

    2101

  • nicolagulmini/virulent_factor_classification

    Model that computes the probability of a protein to be a virulence factor.

    Language:Jupyter Notebook2101

  • Strong-Lab/Prophage_in_NTM

    This repository contains the data and methods for characterization of integrated prophages within different species of clinical non-tuberculous mycobacterial genomes

    Language:Jupyter Notebook1200