wright-fisher-model
There are 9 repositories under wright-fisher-model topic.
zhangyi-he/WFM-1L-DiffusApprox-MLE
Estimation of natural selection and allele age from time series allele frequency data using a novel likelihood-based approach
TomMakesThings/Wright-Fisher-Simulator
Simulator for the Wright-Fisher model of genetic drift for haploid and diploid populations
VeaLi/Stats
Poker test for independence, Inversion method, Method of approximations, Rejection method, Quadratic congruent random number generator, Freedman–Diaconis rule, Fixation Index, Extended Haplotype Homozygosity, Wright-Fisher model
zhangyi-he/WFM-1L-DiffusApprox-PMMH
Estimating temporally variable selection intensity from ancient DNA data
zhangyi-he/WFM-1L-DiffusApprox-PMMHwGibbs
Estimating temporally variable selection intensity from ancient DNA data with a combination of forward- and backward-in-time simulations
zhangyi-he/WFM-2L-DiffusApprox-AdaptPMMH
Estimating temporally variable selection intensity from ancient DNA data with the flexibility of modelling linkage and epistasis
zhangyi-he/WFM-2L-DiffusApprox-PMMH
Detecting and quantifying natural selection at two linked loci from time series data of allele frequencies with forward-in-time simulations
zhangyi-he/WFM-1L-DiffusApprox-BlockPMMH-Gallus
Inferring the timing and strength of natural selection and gene migration in the evolution of chickens from ancient DNA data
zhangyi-he/WFM-2L-Approx
Approximations for the Wright-Fisher model of population dynamics under natural selection at two linked loci