Automated analysis of bacterial motility assays
main.py contains all the running code
calculate_param.py contains the calculation functions: distance(self, coord_x, coord_y); takes in coordinates and calculates the pairwise distances
distance_lr(self, coord_x, coord_y); takes in coordinates and calculates the pairwise distances with a sign (+/-) depending if cooridnates are left or right of x0
conv_dist(self, dist_pixel); takes the distance in pixels is determines by the ruler calibration and calculates assumming 1 cm
angle(self,height,dist,dist_conv_factor); takes the height y0, dist which are all the distances relative to x0, and dist_conv_factor obtained from conv_dist() to calculate the angle, theta