trickytank

trickytank's Stars

• CurtinIDS/power-of-commandline

  Power of the command line elective at Perth ResBaz 2019

  Language:Shell1

• d-cameron/biodemo

  Language:Python11

• Santy-8128/DosageConvertor

  DosageConvertor is a C++ tool to convert dosage files (in VCF format) from Minimac3/4 to other formats such as MaCH or PLINK.

  Language:C++810

• genomicsITER/prepABEL

  BASH scripting to prepare ProbABEL (a software to do survival analysis with dosage data) input files, -Genomic Predictor, INFO, and MAP- from dosage and info VCF files from Michigan Imputation Server

  Language:Shell21

• PawseySC/bio-workshop-18

  Pawsey workshop: containers for bioinformatics

  Language:Shell1910

• dcomtois/summarytools

  R Package to Quickly and Neatly Summarize Data

  Language:R52480

• zhanxw/rvtests

  Rare variant test software for next generation sequencing data

  Language:C++13642

• tidyverse/dtplyr

  Data table backend for dplyr

  Language:R67157

• mattdy/alarmpi

  The Raspberry Pi Smart Alarm Clock

  Language:Python3411

• VCG/upset

  UpSet - Visualizing Intersecting Sets

  Language:JavaScript22863

• travis-perl/helpers

  Travis-CI testing helper for Perl modules (unofficial)

  Language:Shell7929

• github/gitignore

  A collection of useful .gitignore templates

  164k83.1k

• genome-in-a-bottle/giab_data_indexes

  This repository contains data indexes from NIST's Genome in a Bottle project.

  Language:Roff23871

• davidgohel/ggiraph

  make 'ggplot' graphics interactive

  Language:R81574

• bahlolab/exSTRa

  Expanded STR algorithm for Illumina sequencing data

  Language:R238

• Oshlack/STRetch

  Method for detecting STR expansions from short-read sequencing data

  Language:Python6215

• lh3/seqtk

  Toolkit for processing sequences in FASTA/Q formats

  Language:C1.4k307

• quinlan-lab/applied-computational-genomics

  Applied Computational Genomics Course at UU: Spring 2020

  Language:HTML954212

• r-lib/lobstr

  Understanding complex R objects with tools similar to str()

  Language:R30327

• flosse/sloc

  simple tool to count SLOC (source lines of code)

  Language:CoffeeScript95082

• Illumina/ExpansionHunter

  A tool for estimating repeat sizes

  Language:C++18651

• tfwillems/HipSTR

  Genotype and phase short tandem repeats using Illumina whole-genome sequencing data

  Language:C9531

• WGLab/PennCNV

  Copy number vaiation detection from SNP arrays

  Language:C8955

• justinleewells/pogo-optimizer

  MITM data analysis utility for Pokemon GO

  Language:JavaScript502121

• adaptivegenome/repeatseq

  Accurate microsatellite genotypes from high-throughput resequencing data

  Language:C++239

• mgymrek/pybamview

  Browser based application for viewing bam alignments

  Language:Python5617