pip install not working

Question

Closed this issue 6 years ago · 6 comments

Hello,

I'm using umis on an administered server. The install does not work properly (see Closed Issue #55).

I know that the install can work with bioconda, but the admins do not want to use conda install, only pip.

Is there any way you can make the pip install work so we can have a working version on our server?

Thanks,
Magali

Answer 1 · 2019-05-06T17:38:19.000Z

Hi Magali,

I don't have access to update what's on pypi-- @vals, could you bump to the latest version?

In the meantime, the admins can install it with pip if they want like this:

pip install git+https://github.com/vals/umis.git@master

Answer 2 · 2019-05-06T23:30:10.000Z

Sure, I'll update it tomorrow morning.

Answer 3 · 2019-05-07T22:06:51.000Z

Hey, it took a while because my macOS had updated and I needed to remember how to fix gcc. But now the pip package should be updated.

Answer 4 · 2019-05-08T00:00:40.000Z

Awesome, thanks so much Valentine.

Answer 5 · 2019-05-08T09:08:40.000Z

Hi guys,

Thanks for a quick answer. The update does not seem to be pushed onto git though (last commit in February), right?

Thanks,
Magali

Answer 6 · 2019-05-08T15:04:03.000Z

Yeah, we haven't made a release that last commit-- but if you aren't using that feature it won't matter.