vv137's Stars
intbio/gromacs_ff
Trusted force field files for gromacs
tensorflow/lingvo
Lingvo
Oneflow-Inc/oneflow
OneFlow is a deep learning framework designed to be user-friendly, scalable and efficient.
alpa-projects/alpa
Training and serving large-scale neural networks with auto parallelization.
kaiyuyue/torchshard
Slicing a PyTorch Tensor Into Parallel Shards
hpcaitech/FastFold
Optimizing AlphaFold Training and Inference on GPU Clusters
aqlaboratory/openfold
Trainable, memory-efficient, and GPU-friendly PyTorch reproduction of AlphaFold 2
Dertosh/asus-bios-update
Program for easy downloading and update bios asus motherboard (laptops, e.t.c.) on linux
pytorch/PiPPy
Pipeline Parallelism for PyTorch
horovod/horovod
Distributed training framework for TensorFlow, Keras, PyTorch, and Apache MXNet.
kakaobrain/solvent
baidu-research/baidu-allreduce
NVIDIA/Megatron-LM
Ongoing research training transformer models at scale
biolists/folding_tools
A collection of *fold* tools
cambecc/earth
a project to visualize global weather conditions
Dapid/tmscoring
Python implementation of the TMscore program
microsoft/DeepSpeed
DeepSpeed is a deep learning optimization library that makes distributed training and inference easy, efficient, and effective.
PabloEnmanuelRamos/BioBlender21
Blender plugin to process biological data and molecular work.
jasonkyuyim/se3_diffusion
Implementation for SE(3) diffusion model with application to protein backbone generation
BartBruininks/mdvwhole
Density based object completion over PBC.
mdtraj/mdtraj
An open library for the analysis of molecular dynamics trajectories
jhenin/Methods-for-enhanced-sampling-and-free-energy-calculations
Enhanced sampling methods for molecular dynamics simulations
pmodels/oshmpi
OpenSHMEM Implementation on MPI
bjing2016/EigenFold
EigenFold: Generative Protein Structure Prediction with Diffusion Models
phbradley/alphafold_finetune
Python code for fine-tuning AlphaFold to perform protein-peptide binding predictions
spetti/SMURF
dptech-corp/Uni-Fold
An open-source platform for developing protein models beyond AlphaFold.
google-deepmind/alphafold
Open source code for AlphaFold.
bjornwallner/alphafoldv2.2.0
Open source code for AlphaFold.
DeepGraphLearning/torchdrug
A powerful and flexible machine learning platform for drug discovery