wdecoster/chopper

Issues

• The package version for the 0.9.0 tag still says 0.8.0

  #42 opened 2 months ago by akesandgren
  2

• Cannot.Get.ChopperToRun

  #41 opened 3 months ago by dechavezvPUCE
  1

• Conda missing package for Mac M3

  #40 opened 3 months ago by luigallucci
  2

• --contam ：Filter contaminants against a fasta

  #39 opened 3 months ago by zhangguoxuan880
  4

• Cannot use either wget, conda, or mamba to install chopper

  #38 opened 4 months ago by Chatchamew
  7

• minimap2 preset for `--contam`

  #35 opened 4 months ago by FatYuanBao
  9

• Suggestion

  #37 opened 4 years ago by Potatoconomy
  3

• chopper v0.8.0 GLIBC_2.XX not found

  #36 opened 6 months ago by mlhoggard
  2

• confuse problem

  #31 opened 7 months ago by lihaicheng7003
  10

• chopper with bam files

  #27 opened 7 months ago by selmapichot
  1

• error: Found argument 'file.fastq' which wasn't expected, or isn't valid in this context

  #10 opened 7 months ago by dgslos
  8

• Instatlation issue

  #28 opened 8 months ago by NaveenKumar56
  2

• Recommended defaults?

  #20 opened 8 months ago by jolespin
  5

• Give minimap more threads when available.

  #18 opened 8 months ago by Ge0rges
  4

• missing ".with_cigar()" in Aligner?

  #19 opened a year ago by wchengt
  7

• Help with --contam parameter

  #25 opened 9 months ago by NikoLichi
  1

• Not working on M2 Mac

  #24 opened 10 months ago by stachyris
  6

• Not running on aarch64

  #22 opened 10 months ago by ImagoXV
  11

• Issue in Installation

  #21 opened 10 months ago by SelfShubham
  7

• /lib64/libc.so.6 issue

  #12 opened a year ago by mianlee
  5

• Cannot Download Chopper

  #15 opened a year ago by paopaoch
  4

• Nanopore barcode/adapter detection

  #16 opened a year ago by Ge0rges
  2

• Filter out reads marked as contaminants?

  #14 opened a year ago by Ge0rges
  1

• Missing libraries of chopper

  #8 opened 2 years ago by MohammadAliAmir
  9

• sequencing_summary.txt feature

  #9 opened a year ago by kenneditodd
  1

• generation of a log file?

  #7 opened a year ago by brittanycronk
  6

• Version

  #6 opened a year ago by tnn111
  2

• Filtering by timestamps

  #2 opened 2 years ago by jodjo86
  1

• glibc

  #4 opened 2 years ago by colindaven
  4

• Installation instructions

  #5 opened 2 years ago by kim-judge
  2

• Q score interpretation same or slightly different compared to guppy

  #3 opened 2 years ago by gwl2
  1