Table not instantiated

Question

Table not instantiated

Opened this issue 3 years ago · 10 comments

Apirog9 commented 3 years ago

Hello, I am recieving an error while opening an interact.pepxml/mzml pair after Fragpipe search:

java.lang.NumberFormatException: For input string "17,3176"

Java version 1.8 on Windows 10

thanks for support,

Artur Pirog

Answer 1 · 2021-11-23T14:24:26.000Z

Does the psm.tsv/mzml input work?

Answer 2 · 2021-11-23T15:56:14.000Z

Hi Artur,

Could you please share your data with us?

Kai

Answer 3 · 2021-11-23T19:14:59.000Z

With psms/mzml I am getting "Failed to parse MSFrage file, please check your file". I'll try to check the source of this error and share data. Please note that this error appear whenever I try to click on the psm table (which is not correctly displayed).

Answer 4 · 2021-11-23T19:18:39.000Z

I can check it when I receive your data.

Answer 5 · 2021-11-23T19:30:17.000Z

@KaiLiCn Pls check your mail soon

Answer 6 · 2021-11-23T19:34:11.000Z

Got it. Thanks.

Answer 7 · 2021-11-23T20:38:38.000Z

May I ask which version of PDV you tried? Your data works well on my side.

Answer 8 · 2021-11-23T20:41:42.000Z

1.7.4, for me it seem that it may has some compatiblity issues with system. I'll try other PC tomorrow Artur wt., 23 lis 2021 o 21:38 KaiLiCn ***@***.***> napisał(a):

…

May I ask which version of PDV you tried? Your data works well on my side. — You are receiving this because you authored the thread. Reply to this email directly, view it on GitHub <#27 (comment)>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/AFPTOJYJQRRR3PUHMYTXPHLUNP3VRANCNFSM5ITEJIGQ> . Triage notifications on the go with GitHub Mobile for iOS <https://apps.apple.com/app/apple-store/id1477376905?ct=notification-email&mt=8&pt=524675> or Android <https://play.google.com/store/apps/details?id=com.github.android&referrer=utm_campaign%3Dnotification-email%26utm_medium%3Demail%26utm_source%3Dgithub>.

Answer 9 · 2021-11-23T20:44:15.000Z

Please let me know if you have the same problem. I tried it on my Mac, Win10, and Win11 PC. They all work well.

Answer 10 · 2021-11-26T19:29:38.000Z

This issue was present only at one machine. On other(also Win10) worked fine.