python3.12 incompatibility?
Closed this issue · 1 comments
SamCox822 commented
this issue is new for python 3.12
Building wheels for collected packages: molbloom
Building wheel for molbloom (pyproject.toml) ... error
error: subprocess-exited-with-error
× Building wheel for molbloom (pyproject.toml) did not run successfully.
│ exit code: 1
╰─> [116 lines of output]
running bdist_wheel
running build
running build_py
creating build
creating build/lib.macosx-11.1-arm64-cpython-312
creating build/lib.macosx-11.1-arm64-cpython-312/molbloom
copying molbloom/version.py -> build/lib.macosx-11.1-arm64-cpython-312/molbloom
copying molbloom/__init__.py -> build/lib.macosx-11.1-arm64-cpython-312/molbloom
creating build/lib.macosx-11.1-arm64-cpython-312/molbloom/data
copying molbloom/data/zinc-instock-mini.bloom -> build/lib.macosx-11.1-arm64-cpython-312/molbloom/data
running build_ext
building 'molbloom.bloom' extension
creating build/temp.macosx-11.1-arm64-cpython-312
creating build/temp.macosx-11.1-arm64-cpython-312/molbloom
clang -fno-strict-overflow -DNDEBUG -O2 -Wall -fPIC -O2 -isystem /Users/samcox/anaconda3/envs/molbloom/include -arch arm64 -fPIC -O2 -isystem /Users/samcox/anaconda3/envs/molbloom/include -arch arm64 -Imolbloom/bloom/ -Imolbloom/bloom -Imolbloom/bloom -I/Users/samcox/anaconda3/envs/molbloom/include/python3.12 -c molbloom/bloom.c -o build/temp.macosx-11.1-arm64-cpython-312/molbloom/bloom.o
In file included from molbloom/bloom.c:768:
molbloom/bloom/bloom.h:68:78: warning: format specifies type 'unsigned long' but the argument has type 'uint64_t' (aka 'unsigned long long') [-Wformat]
printf("bloom_new: %s size=%lu bits, MB=%2f, n=%lu k=%u fp=%f\n", b->name, b->m,
~~~ ^~~~
%llu
molbloom/bloom/bloom.h:69:43: warning: format specifies type 'unsigned long' but the argument has type 'uint64_t' (aka 'unsigned long long') [-Wformat]
((float)b->m) / 1024 / 1024 / 8, n, b->k,
^
molbloom/bloom/bloom.h:158:67: warning: format specifies type 'unsigned long' but the argument has type 'uint64_t' (aka 'unsigned long long') [-Wformat]
printf("bloom_read: %s size=%lu bits, MB=%2f, k=%u\n", b->name, b->m,
~~~ ^~~~
%llu
molbloom/bloom.c:3870:36: error: no member named 'curexc_traceback' in 'struct _ts'
PyObject* tmp_tb = tstate->curexc_traceback;
~~~~~~ ^
molbloom/bloom.c:3873:21: error: no member named 'curexc_traceback' in 'struct _ts'
tstate->curexc_traceback = tb;
~~~~~~ ^
molbloom/bloom.c:4089:27: warning: 'ma_version_tag' is deprecated [-Wdeprecated-declarations]
return likely(dict) ? __PYX_GET_DICT_VERSION(dict) : 0;
^
molbloom/bloom.c:1244:65: note: expanded from macro '__PYX_GET_DICT_VERSION'
#define __PYX_GET_DICT_VERSION(dict) (((PyDictObject*)(dict))->ma_version_tag)
^
/Users/samcox/anaconda3/envs/molbloom/include/python3.12/cpython/dictobject.h:22:5: note: 'ma_version_tag' has been explicitly marked deprecated here
Py_DEPRECATED(3.12) uint64_t ma_version_tag;
^
/Users/samcox/anaconda3/envs/molbloom/include/python3.12/pyport.h:317:54: note: expanded from macro 'Py_DEPRECATED'
#define Py_DEPRECATED(VERSION_UNUSED) __attribute__((__deprecated__))
^
molbloom/bloom.c:4101:36: warning: 'ma_version_tag' is deprecated [-Wdeprecated-declarations]
return (dictptr && *dictptr) ? __PYX_GET_DICT_VERSION(*dictptr) : 0;
^
molbloom/bloom.c:1244:65: note: expanded from macro '__PYX_GET_DICT_VERSION'
#define __PYX_GET_DICT_VERSION(dict) (((PyDictObject*)(dict))->ma_version_tag)
^
/Users/samcox/anaconda3/envs/molbloom/include/python3.12/cpython/dictobject.h:22:5: note: 'ma_version_tag' has been explicitly marked deprecated here
Py_DEPRECATED(3.12) uint64_t ma_version_tag;
^
/Users/samcox/anaconda3/envs/molbloom/include/python3.12/pyport.h:317:54: note: expanded from macro 'Py_DEPRECATED'
#define Py_DEPRECATED(VERSION_UNUSED) __attribute__((__deprecated__))
^
molbloom/bloom.c:4105:56: warning: 'ma_version_tag' is deprecated [-Wdeprecated-declarations]
if (unlikely(!dict) || unlikely(tp_dict_version != __PYX_GET_DICT_VERSION(dict)))
^
molbloom/bloom.c:1244:65: note: expanded from macro '__PYX_GET_DICT_VERSION'
#define __PYX_GET_DICT_VERSION(dict) (((PyDictObject*)(dict))->ma_version_tag)
^
/Users/samcox/anaconda3/envs/molbloom/include/python3.12/cpython/dictobject.h:22:5: note: 'ma_version_tag' has been explicitly marked deprecated here
Py_DEPRECATED(3.12) uint64_t ma_version_tag;
^
/Users/samcox/anaconda3/envs/molbloom/include/python3.12/pyport.h:317:54: note: expanded from macro 'Py_DEPRECATED'
#define Py_DEPRECATED(VERSION_UNUSED) __attribute__((__deprecated__))
^
molbloom/bloom.c:4126:9: warning: 'ma_version_tag' is deprecated [-Wdeprecated-declarations]
__PYX_PY_DICT_LOOKUP_IF_MODIFIED(
^
molbloom/bloom.c:1251:16: note: expanded from macro '__PYX_PY_DICT_LOOKUP_IF_MODIFIED'
if (likely(__PYX_GET_DICT_VERSION(DICT) == __pyx_dict_version)) {\
^
molbloom/bloom.c:1244:65: note: expanded from macro '__PYX_GET_DICT_VERSION'
#define __PYX_GET_DICT_VERSION(dict) (((PyDictObject*)(dict))->ma_version_tag)
^
/Users/samcox/anaconda3/envs/molbloom/include/python3.12/cpython/dictobject.h:22:5: note: 'ma_version_tag' has been explicitly marked deprecated here
Py_DEPRECATED(3.12) uint64_t ma_version_tag;
^
/Users/samcox/anaconda3/envs/molbloom/include/python3.12/pyport.h:317:54: note: expanded from macro 'Py_DEPRECATED'
#define Py_DEPRECATED(VERSION_UNUSED) __attribute__((__deprecated__))
^
molbloom/bloom.c:4126:9: warning: 'ma_version_tag' is deprecated [-Wdeprecated-declarations]
__PYX_PY_DICT_LOOKUP_IF_MODIFIED(
^
molbloom/bloom.c:1255:30: note: expanded from macro '__PYX_PY_DICT_LOOKUP_IF_MODIFIED'
__pyx_dict_version = __PYX_GET_DICT_VERSION(DICT);\
^
molbloom/bloom.c:1244:65: note: expanded from macro '__PYX_GET_DICT_VERSION'
#define __PYX_GET_DICT_VERSION(dict) (((PyDictObject*)(dict))->ma_version_tag)
^
/Users/samcox/anaconda3/envs/molbloom/include/python3.12/cpython/dictobject.h:22:5: note: 'ma_version_tag' has been explicitly marked deprecated here
Py_DEPRECATED(3.12) uint64_t ma_version_tag;
^
/Users/samcox/anaconda3/envs/molbloom/include/python3.12/pyport.h:317:54: note: expanded from macro 'Py_DEPRECATED'
#define Py_DEPRECATED(VERSION_UNUSED) __attribute__((__deprecated__))
^
molbloom/bloom.c:4389:55: error: no member named 'ob_digit' in 'struct _longobject'
const digit* digits = ((PyLongObject*)x)->ob_digit;
~~~~~~~~~~~~~~~~~~ ^
molbloom/bloom.c:4444:55: error: no member named 'ob_digit' in 'struct _longobject'
const digit* digits = ((PyLongObject*)x)->ob_digit;
~~~~~~~~~~~~~~~~~~ ^
molbloom/bloom.c:4623:55: error: no member named 'ob_digit' in 'struct _longobject'
const digit* digits = ((PyLongObject*)x)->ob_digit;
~~~~~~~~~~~~~~~~~~ ^
molbloom/bloom.c:4678:55: error: no member named 'ob_digit' in 'struct _longobject'
const digit* digits = ((PyLongObject*)x)->ob_digit;
~~~~~~~~~~~~~~~~~~ ^
molbloom/bloom.c:5129:47: error: no member named 'ob_digit' in 'struct _longobject'
const digit* digits = ((PyLongObject*)b)->ob_digit;
~~~~~~~~~~~~~~~~~~ ^
8 warnings and 7 errors generated.
error: command '/usr/bin/clang' failed with exit code 1
[end of output]
note: This error originates from a subprocess, and is likely not a problem with pip.
ERROR: Failed building wheel for molbloom
Failed to build molbloom
ERROR: Could not build wheels for molbloom, which is required to install pyproject.toml-based projects
whitead commented
Should be fixed now