#Acquire the estimated time for each node and add time axis when plotting the result tree

[QianGuoPKU]

Hi,

Thanks for providing such excellent tool!
My question is, how to acquire the estimated time for each node? As i understand, BactDating can output the CI intervals. But I also need the estimation in addition to the CI intervals. And, do you have some idea to add the time axis when plotting the res$tree?

I would appreciate if you could reply!

Best,
Qian

[xavierdidelot]

The res$tree contains the point estimate of each node date. If you use plot(res) instead of plot(res$tree) the tree will be shown with the time axis. You can also use plot(res,'treeCI') to show the credible intervals.