xin-huang

xin-huang's Stars

• ChenHuaLab/HaploSweep

  HaploSweep is a method for detecting and categorizing soft and hard selective sweeps based on haplotype structure.

  Language:C71

• bklieger-groq/g1

  g1: Using Llama-3.1 70b on Groq to create o1-like reasoning chains

  Language:Python3.3k304

• joepickrell/1000-genomes-genetic-maps

  Genetic maps interpolated to sites in the 1000 Genomes project

  Language:Python4720

• soo-h/DASweepDetect

  Detection and classification selective sweep use domain adaptive model

  Language:Python71

• squidfunk/mkdocs-material

  Documentation that simply works

  Language:HTML20.4k3.5k

• SciML/DifferentialEquations.jl

  Multi-language suite for high-performance solvers of differential equations and scientific machine learning (SciML) components. Ordinary differential equations (ODEs), stochastic differential equations (SDEs), delay differential equations (DDEs), differential-algebraic equations (DAEs), and more in Julia.

  Language:Julia2.8k226

• SciML/NeuralPDE.jl

  Physics-Informed Neural Networks (PINN) Solvers of (Partial) Differential Equations for Scientific Machine Learning (SciML) accelerated simulation

  Language:Julia971195

• ma-xu/Context-Cluster

  [ICLR 2023 Oral] Image as Set of Points

  Language:Python53740

• datawhalechina/leedl-tutorial

  《李宏毅深度学习教程》（李宏毅老师推荐👍，苹果书🍎），PDF下载地址：https://github.com/datawhalechina/leedl-tutorial/releases

  Language:Jupyter Notebook13.2k2.9k

• medical-genomics-group/gVAMP

  Vector Approximate Message Passing inference framework for GWAS

  Language:C++144

• kr-colab/mapNN

  neural network for estimating demographic maps from SNPs

  Language:Python81

• jthlab/phlash

  Accelerated Bayesian inference of population size history from whole genome data.

  Language:Python11

• Popgen48/scalepopgen

  Language:Nextflow183

• kr-colab/discoal

  discoal is a coalescent simulation program capable of simulating models with recombination, selective sweeps, and demographic changes including population splits, admixture events, and ancient samples

  Language:TeX4810

• pytest-dev/pytest

  The pytest framework makes it easy to write small tests, yet scales to support complex functional testing

  Language:Python11.9k2.7k

• anc95/ChatGPT-CodeReview

  🐥 A code review bot powered by ChatGPT

  Language:JavaScript4k384

• xai-org/grok-1

  Grok open release

  Language:Python49.5k8.3k

• krahets/hello-algo

  《Hello 算法》：动画图解、一键运行的数据结构与算法教程。支持 Python, Java, C++, C, C#, JS, Go, Swift, Rust, Ruby, Kotlin, TS, Dart 代码。简体版和繁体版同步更新，English version ongoing

  Language:Java95.9k12.2k

• kr-colab/disperseNN2

  estimating dispersal distance from georeferenced polymorphisms

  Language:Python32

• cbg-ethz/V-pipe

  V-pipe is a pipeline designed for analysing NGS data of short viral genomes

  Language:Jupyter Notebook12945

• alelievr/Mixture

  Mixture is a powerful node-based tool crafted in unity to generate all kinds of textures in realtime

  Language:C#1.2k125

• joblib/joblib

  Computing with Python functions.

  Language:Python3.8k413

• snakemake/snakefmt

  The uncompromising Snakemake code formatter

  Language:Python14829

• psf/black

  The uncompromising Python code formatter

  Language:Python38.7k2.4k

• snakemake/snakemake-wrappers

  This is the development home of the Snakemake wrapper repository, see

  Language:Python213184

• jkimlab/PAPipe

  291

• mpi4py/mpi4py

  Python bindings for MPI

  Language:Python797119

• SchriderLab/TreeSeqPopGenInference

  Exploring how to use tree sequences for multiple population genetic inference tasks.

  Language:Shell11

• lobehub/lobe-chat

  🤯 Lobe Chat - an open-source, modern-design AI chat framework. Supports Multi AI Providers( OpenAI / Claude 3 / Gemini / Ollama / Azure / DeepSeek), Knowledge Base (file upload / knowledge management / RAG ), Multi-Modals (Vision/TTS) and plugin system. One-click FREE deployment of your private ChatGPT/ Claude application.

  Language:TypeScript41.8k9.4k

• openai/gpt-2

  Code for the paper "Language Models are Unsupervised Multitask Learners"

  Language:Python22.3k5.5k