xjqian's Stars
cMadan/openMorph
Curated list of open-access databases with human structural MRI data
bambinos/bambi
BAyesian Model-Building Interface (Bambi) in Python.
ReproNim/neurodocker
Generate custom Docker and Singularity images, and minimize existing containers
neuropoly/gmseg
Spinal cord gray matter segmentation using deep dilated convolutions.
romainVala/matspec
matlab code from spectro preprocessing
douglaslab/grantmerge
g-suite add-on for merging sheets data into docs templates
CIC-methods/FID-A
Toolbox for simulation and processing of in-vivo magnetic resonance spectroscopy (MRS) data
bids-apps/HCPPipelines
A BIDS App for minimal preprocessing using the HCP Pipelines
danjonpeterson/brain_printer
Create a docker image to get an .stl from an MRI scan, for 3d printing
mvdoc/gfusion
Implementation of DDR method to densify graphs using similarities between two sources
hakimel/reveal.js
The HTML Presentation Framework
calligross/ggthemeassist
A RStudio addin for ggplot2 theme tweaking
Washington-University/gradunwarp
Gradient Unwarping in Python
scipy-lectures/scientific-python-lectures
Tutorial material on the scientific Python ecosystem
preprocessed-connectomes-project/quality-assessment-protocol
Scripts and documentation for the PCP's protocol for assessing data quality.
Washington-University/HCPpipelines
Processing pipelines for the HCP
pydicom/pydicom
Read, modify and write DICOM files with python code
rordenlab/dcm2niix
dcm2nii DICOM to NIfTI converter: compiled versions available from NITRC
gallantlab/pycortex
Pycortex is a python-based toolkit for surface visualization of fMRI data
nipy/nipype
Workflows and interfaces for neuroimaging packages
automaticanalysis/automaticanalysis
Automatic Analysis (aa)
spinalcordtoolbox/spinalcordtoolbox
Comprehensive and open-source library of analysis tools for MRI of the spinal cord.
nipy/nibabel
Python package to access a cacophony of neuro-imaging file formats
BIC-MNI/minc-toolkit
Metaproject uniting all the available minc tools
ANTsX/ANTs
Advanced Normalization Tools (ANTs)
uwmadison-chm/bioread
Utilities to work with files from BIOPAC's AcqKnowlege software
plotly/plotly.R
An interactive graphing library for R
nipy/nipy
Neuroimaging in Python FMRI analysis package
willwade/svg_utils
Python tools to create and manipulate SVG files
CMRR-C2P/MB
Support for CMRR multi-band pulse sequences