ys-zong/MEDFAIR

Covid-CT-MD missing preprocessing dicom to numpy?

SteffGroefsema opened this issue · 2 comments

First of all, thank you for your elaborate work on the MEDFAIR dataset.
However, I think the preprocessing step how to convert the dicom files of the patients to .npy files is missing. Can you share how you build that part of the dataset?

Hi, thanks for your interest. I somehow lost the original data preprocessing code for this part, but I think I used pydicom for the conversion. It should be relatively easy if you follow their example to extract the data values.

Thank you for your response.