ysut

ysut's Stars

• marbl/HG002

  A complete diploid human genome

  1035

• rgcgithub/clamms

  CLAMMS is a scalable tool for detecting common and rare copy number variants from whole-exome sequencing data.

  Language:C2910

• ksahlin/strobealign

  Aligns short reads using dynamic seed size with strobemers

  Language:C++15017

• ACEnglish/tdb

  Tandem repeat database and analysis queries

  Language:Jupyter Notebook51

• informationsea/vcf-rs

  Rust implmentation of VCF parser

  Language:Rust232

• adavi4/SAI-10k-calc

  Language:R8

• inunekousapon/pyexcelize

  This package indirectly calls Excelize in Go from Python

  Language:Python4

• kampersanda/sucds

  Collection of succinct data structures in Rust

  Language:Rust814

• Netflix/vmaf

  Perceptual video quality assessment based on multi-method fusion.

  Language:Python4.7k755

• google-deepmind/alphamissense

  Language:Python51966

• ZuchnerLab/Maverick

  A Mendelian approach to variant effect prediction built in keras

  Language:Jupyter Notebook166

• mikecormier/ConSplice

  Constrained Splicing python module

  Language:Python71

• xf-omics/SHINE

  prediction of pathogenicity for inframe indels

  Language:C++3

• clauswilke/dataviz

  A book covering the fundamentals of data visualization

  Language:HTML3.2k701

• Maggi-Chen/DeBreak

  Structural variant caller for real-time long-read sequencing data

  Language:Python556

• E869120/math-algorithm-book

  拙著『「アルゴリズム×数学」が基礎からしっかり身につく本』（2021/12/25 発売）の GitHub ページです。演習問題の解答や、C++ 以外のソースコードなどが掲載されています。ぜひご活用ください。

  Language:Java1k97

• edg1983/GREEN-VARAN

  Annotate non-coding regulatory vars using our GREEN-DB, prediction scores, conservation and pop AF

  Language:R186

• bitsyamagu/Effective-programming-mostly-C

  写経とインクリメンタル開発によるプログラミング学習

  Language:C1

• kazumisawa/genome-infomation-analysis

  Scripts for a textbook "Genome Informatics Analysis"

  Language:Python2

• google/styleguide

  Style guides for Google-originated open-source projects

  Language:HTML37.5k13.3k

• mohzeki222/ohm_princess

  「Pythonで機械学習入門-深層学習から敵対的生成ネットワークまで」（オーム社）サポートページ

  Language:Jupyter Notebook3

• ctgk/PRML

  PRML algorithms implemented in Python

  Language:Jupyter Notebook11.5k3.3k

• bitsyamagu/jnord

  Java version of Nord (Target CNV detection)

  Language:Java2

• OATML-Markslab/EVE

  Official repository for the paper "Large-scale clinical interpretation of genetic variants using evolutionary data and deep learning". Joint collaboration between the Marks lab and the OATML group.

  Language:Python15735

• Illumina/SpliceAI

  A deep learning-based tool to identify splice variants

  Language:Python409160

• monarch-initiative/SvAnna

  Efficient and accurate pathogenicity prediction for coding and regulatory structural variants in long-read genome sequencing

  Language:Java334

• kircherlab/CADD-SV

  CADD-SV – a framework to score the effect of structural variants

  Language:Python143

• sammy-suyama/BayesBook

  「機械学習スタートアップシリーズ ベイズ推論による機械学習入門」のサンプルコード

  Language:Julia17225

• mquinodo/AutoMap

  Tool to find regions of homozygosity (ROHs) from sequencing data.

  Language:Shell289