Optimize.py does not allow for outdir specification
Opened this issue · 3 comments
sophiejwalton commented
zjshi commented
Hi sophiejwalton, unfortunately optimize.py does not have a --out argument. Could you please try --tmp to see if it works for your case? I apologize for my delayed response!
mengqingren commented
Hello, Dr, if i have many samples to run, dose it mean that i will run "GT_Pro optimize" for every sample?
zjshi commented
@mengqingren, not necessarily unless each sample is going to be run with a different hardware configuration.