/sentieon-scripts

Helper scripts for biological data processing from Sentieon

Primary LanguageShellBSD 2-Clause "Simplified" LicenseBSD-2-Clause

Sentieon-scripts

Helper scripts for biological data processing from Sentieon

Available scripts

  • Example Pipelines - Example Sentieon pipelines implemented in shell script.
  • Memest - Memory usage estimation for Sentieon variant callers from a BAM header and index (.bai) files.
  • MNP - Merge neighboring variants along the same haplotype from Sentieon somatic variant callers into multi-nucleotide polymorphisms (MNPs).

License

Unless otherwise indicated, files in this repository are licensed under a BSD 2-Clause License.