Pinned Repositories
anaic-analysis
A Novel Anti-Influenza Combined Therapy Assessed by Single Cell RNA-sequencing (analysis notebooks)
anaic-filtered-matrices
bayex
Bayesian networks for finitely-supported distributions
boost-python-examples
Some examples for the use of boost::python
bpcqueue
A producer-aware MPMC bounded queue in C++11
BURST
An ultrafast optimal aligner for mapping large NGS data to large genome databases.
fpricing
Vanilla and spread option pricing with affine models
nixpkgs
Nix Packages collection
scanpy-nix-flake
Nix flake packaging scanpy and jupyter notebook server
1pakch's Repositories
1pakch/jupyter-flake
jupyter server flakes with pluggable kernels
1pakch/nixpkgs
Nix Packages collection
1pakch/anaic-analysis
A Novel Anti-Influenza Combined Therapy Assessed by Single Cell RNA-sequencing (analysis notebooks)
1pakch/anaic-filtered-matrices
1pakch/bayex
Bayesian networks for finitely-supported distributions
1pakch/bpcqueue
A producer-aware MPMC bounded queue in C++11
1pakch/BURST
An ultrafast optimal aligner for mapping large NGS data to large genome databases.
1pakch/scanpy-nix-flake
Nix flake packaging scanpy and jupyter notebook server
1pakch/bwapy
Python bindings to bwa mem
1pakch/camunda-client
Camunda External Task Client in Python
1pakch/cnpy
library to read/write .npy and .npz files in C/C++
1pakch/COSMOS2
Python Scientific Pipeline Management System
1pakch/cubature
Adaptive integration routines by Steven G. Johnson with an automated build system
1pakch/dotfiles
common configuration files for bash, vim, git e.t.c.
1pakch/elixir
Elixir is a dynamic, functional language designed for building scalable and maintainable applications
1pakch/HiC-Pro
HiC-Pro: An optimized and flexible pipeline for Hi-C data processing
1pakch/hice
Lean and fast mapper for Hi-C data based on minimap2
1pakch/ilya-kolpakov.github.io
Site hosted on github.io
1pakch/jsondate
JSON with datetime handling
1pakch/minimap2
A versatile pairwise aligner for genomic and spliced nucleotide sequences
1pakch/mofapy2-env
A python env with mofapy2 package packaged as a nix flake
1pakch/optparse
C++ implementation of optparse (header-only fork of https://github.com/weisslj/cpp-optparse)
1pakch/pyiqfeed
Python LIbrary for reading DTN's IQFeed
1pakch/pylance-release
Documentation and issues for Pylance
1pakch/pymc3
Probabilistic Programming in Python: Bayesian Modeling and Probabilistic Machine Learning with Theano
1pakch/python-poetry-alpine
Alpine based Dockerfile for python poetry dependency management
1pakch/quandl-python
1pakch/r-mofa2-env
R environment with MOFA2 and tidyverse
1pakch/requests-unixsocket
Use requests to talk HTTP via a UNIX domain socket
1pakch/sbt-gitlab
sbt plugin to allow dependency resolution and artifact publishing for gitlab