Pinned Repositories
automaticanalysis
Automatic analysis
BrainSpace
BrainSpace is an open-access toolbox that allows for the identification and analysis of gradients from neuroimaging and connectomics datasets | available in both Python and Matlab |
CBIG
Ferretome
Ferretome Ferret brain collation database
fmriprep
fMRIprep is a functional magnetic resonance image pre-processing pipeline that is designed to provide an easily accessible, state-of-the-art interface that is robust to differences in scan acquisition protocols and that requires minimal user input, while providing easily interpretable and comprehensive error and output reporting.
GraphVar_2.0
GitHub for GraphVar 2.0: A user-friendly toolbox for machine learning on functional connectivity measures.
hbp-validation-framework
NBS-Predict
A prediction-based extension of network-based statistics.
nest-simulator
The NEST simulator
tvb-library
The science behind The Virtual Brain
4n4574514's Repositories
4n4574514/CBIG
4n4574514/GraphVar_2.0
GitHub for GraphVar 2.0: A user-friendly toolbox for machine learning on functional connectivity measures.
4n4574514/automaticanalysis
Automatic analysis
4n4574514/BrainSpace
BrainSpace is an open-access toolbox that allows for the identification and analysis of gradients from neuroimaging and connectomics datasets | available in both Python and Matlab |
4n4574514/fmriprep
fMRIprep is a functional magnetic resonance image pre-processing pipeline that is designed to provide an easily accessible, state-of-the-art interface that is robust to differences in scan acquisition protocols and that requires minimal user input, while providing easily interpretable and comprehensive error and output reporting.
4n4574514/NBS-Predict
A prediction-based extension of network-based statistics.
4n4574514/nest-simulator
The NEST simulator
4n4574514/nh2020-jupyterhub
hub.neurohackademy.org: Deployment config, docker image, documentation.
4n4574514/tvb-framework
The Virtual Brain framework. Requires tvb-library
4n4574514/3d-force-graph
3D force-directed graph component using ThreeJS/WebGL
4n4574514/BigBrainWarp
4n4574514/boutiques
A cross-platform descriptive command-line framework for applications
4n4574514/hbp-validation-framework
4n4574514/tvb-library
The science behind The Virtual Brain
4n4574514/clinica
Software platform for clinical neuroimaging studies
4n4574514/course-content
Summer course content for Neuromatch Academy
4n4574514/deep-image-prior
Image restoration with neural networks but without learning.
4n4574514/DeOldify
A Deep Learning based project for colorizing and restoring old images (and video!)
4n4574514/landmark-reg
Landmark based registration of brain imaging volumes
4n4574514/mindboggle
Automated anatomical brain label/shape analysis software (+ website)
4n4574514/MRIcroGL
GLSL volume ray casting rendering: compiled versions available from NITRC. Able to view NIfTI, DICOM, MGH, MHD, NRRD, AFNI format images.
4n4574514/netpyne
A Python package to facilitate the development, parallel simulation, optimization and analysis of multiscale biological neuronal networks in NEURON.
4n4574514/neuroshapes
Open schemas for F.A.I.R. neuroscience data
4n4574514/ohbm2020-posters
Centralized registry of Jitsi rooms and pdfs for OHBM 2020 posters.
4n4574514/PySurfer
Cortical neuroimaging visualization in Python
4n4574514/pysurfing
Visualizing with Freesurfer using Python
4n4574514/resources
A collaborative list of resources for Computational Neuroscience
4n4574514/reStream
Stream your reMarkable screen over SSH.
4n4574514/tvb-pack
Useful super pack for working with TVB
4n4574514/tvb-root
Main TVB codebase