/Oyster_River_Protocol

Official Repository of the Oyster River Protocol for Transcriptome Assembly

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Oyster River Protocol

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Official Repository of the Oyster River Protocol for Transcriptome Assembly

Please see http://oyster-river-protocol.readthedocs.io/en/latest/ and https://hackmd.io/s/SJhOQvkVm# for instructions about how to run and install.

To Be Added - highest to lowest priority

  • support for genetic code selection
  • support for read downsampling when there are too many
  • support for redundancy recovery by remapping unmapped reads on sub-assemblies
  • support for graphical assembly report