A-Alaa
ML+health PhD student at Imperial College London. Into bioinformatics, EHRs, time series, networks.
Pinned Repositories
action_cable_chat_app
The chat app for Learn Enough Action Cable to Be Dangerous
Aleph
A library for exploring persistent homology
asap2_web
cv-assignments
pathnorm_pybind
1-path-norm implementation in Python/NumPy and C++/Eigen.
rosalind-cpp
Basic bioinformatics algorithms implementation using c++14
MC_MicroSimilarities
WEVOTE-web
Cloud package of WEVOTE framework
ICE-NODE
Integration of Clinical Embeddings with Neural ODEs
sbme-tutorials.github.io
Repository for some teaching materials in the Biomedical Engineering Dept. at Cairo Univsity
A-Alaa's Repositories
A-Alaa/cv-assignments
A-Alaa/pathnorm_pybind
1-path-norm implementation in Python/NumPy and C++/Eigen.
A-Alaa/rosalind-cpp
Basic bioinformatics algorithms implementation using c++14
A-Alaa/action_cable_chat_app
The chat app for Learn Enough Action Cable to Be Dangerous
A-Alaa/Aleph
A library for exploring persistent homology
A-Alaa/asap2_web
A-Alaa/conan_dlib
Conan recipe for dlib library http://dlib.net
A-Alaa/databook_python
IPython notebooks with demo code intended as a companion to the book "Data-Driven Science and Engineering: Machine Learning, Dynamical Systems, and Control" by Steven L. Brunton and J. Nathan Kutz
A-Alaa/diffrax
Numerical differential equation solvers in JAX. Autodifferentiable and GPU-capable. https://docs.kidger.site/diffrax/
A-Alaa/dna-compression
A simple example which shows how DNA data can be efficiently stored in C++.
A-Alaa/easy-neural-ode
Code for the paper "Learning Differential Equations that are Easy to Solve"
A-Alaa/fastpages
An easy to use blogging platform that supports Jupyter Notebooks.
A-Alaa/Graphical-modelling-continuous-time
Graphical modelling with time series data using an ODE model
A-Alaa/khiva
An open-source library of algorithms to analyse time series in GPU and CPU.
A-Alaa/Machine-learning-for-proteins
Listing of papers about machine learning for proteins.
A-Alaa/mlflow
Open source platform for the machine learning lifecycle
A-Alaa/pdd_new
A-Alaa/protein-localization-datasets
A-Alaa/quantulum
Python library for information extraction of quantities from unstructured text
A-Alaa/rails-task-panel-wbsockets
A-Alaa/submissions
An open source conference submission and review system. We've been using and enhancing this systems since AgileBrazil 2010.