AI-Elmanawy/Hyperspectral-image-analysis

Open-source software for analyzing hyperspectral images and other sets of plant phenotyping data.

HSI-PP is a stand-alone, automated, and open-source hyperspectral image processing platform adapted to various applications in plant phenotyping to serve the plant research community. HSI-PP integrates advanced image processing procedures and can extract meaningful information from different kinds of hyperspectral images and, therefore, improves the decision-making process. In addition, HSI-PP is able to prepare the hyperspectral images for deep-learning analysis and train the machine learning model for classification and regression.

You have to be sure that sound work on your computer before run this softwrae.

After downloading the password for extraction (TPJ-2022), then after extracting run the "HSI-PP.exe" file from the subfolder.

Please check the new version of this software at this link "https://agrsuezedu-my.sharepoint.com/:u:/g/personal/a_elmanawy_90_agr_suez_edu_eg/EYTCKsGLf49IhIVUiFLwbrQBmySQi2xCpnnb-a02_Rr26A?e=jvAQ3A".

This new version (V1.2) does not require any password, after downloading and extracting run the "HSI-PP.exe" file from the subfolder. Wait a few second after "Administrator window" opened, the software will be opened automatically.

please cite this software as: "ElManawy, A. I., Sun, D., Abdalla, A., Zhu, Y., & Cen, H. (2022). HSI-PP: A flexible open-source software for hyperspectral imaging-based plant phenotyping. Computers and Electronics in Agriculture, 200, 107248."

script compatible with python 3.7 or newer

After HSI-PP starts, you will see the main window and a text window (called terminal) underneath. Do not close the terminal, if you do, HSI-PP will shut down. Informational messages from processing operations or errors will be displayed in the terminal. Please report crashes and any associated messages to us and we will try to fix them.