Pre-Trained Models Calibration Issue

Question

Pre-Trained Models Calibration Issue

Opened this issue a year ago · 1 comments

When trying to run the "python3 gnomix.py demo/data/small_query_chr22.vcf.gz demo_output 14 True pretrained_gnomix_models/chr14/model_chm_14.pkl > ./demo/pretrained_log.txt" command, I keep getting this error message:
ModuleNotFoundError: No module named 'calibration'

Answer 1 · 2023-10-20T10:27:03.000Z

Hi,
seems the uncertainty-calibration was not installed
try the following line:

pip3 install uncertainty-calibration