ANickerson
Data Neuroscientist - Applying data science to neuroscience, from physiology to genomic data.
Pinned Repositories
analysis-tools
Code for reading data saved by the Open Ephys GUI
AutoMower-BLE
This is an unofficial reverse engineered Husqvarna Automower Connect BLE library. This allows connecting and controlling an Automower without any accounts, cloud or network connection.
dxCompiler
WDL and CWL compiler for the DNAnexus platform
kilosort-py
A python port of Kilosort
ldsc
LD Score Regression (LDSC)
manubot
Python utilities for Manubot: Manuscripts, open and automated
markdown-links
Command that displays a graph of local links between markdown files
open-cravat
A modular annotation tool for genomic variants
openMNGlab
Data analysis framework for microneurography recordings
platform-app
The new Open Targets Platform app
ANickerson's Repositories
ANickerson/kilosort-py
A python port of Kilosort
ANickerson/analysis-tools
Code for reading data saved by the Open Ephys GUI
ANickerson/AutoMower-BLE
This is an unofficial reverse engineered Husqvarna Automower Connect BLE library. This allows connecting and controlling an Automower without any accounts, cloud or network connection.
ANickerson/dxCompiler
WDL and CWL compiler for the DNAnexus platform
ANickerson/ldsc
LD Score Regression (LDSC)
ANickerson/manubot
Python utilities for Manubot: Manuscripts, open and automated
ANickerson/markdown-links
Command that displays a graph of local links between markdown files
ANickerson/open-cravat
A modular annotation tool for genomic variants
ANickerson/openMNGlab
Data analysis framework for microneurography recordings
ANickerson/platform-app
The new Open Targets Platform app
ANickerson/plugin-GUI-1
Software for processing, recording, and visualizing multichannel electrophysiology data
ANickerson/public
Public documents for the Master of Data Science program at the University of British Columbia
ANickerson/pycwt
Continuous wavelet transform module for Python. Includes a collection of routines for wavelet transform and statistical analysis via FFT algorithm. This module references to the numpy, scipy and pylab Python packages.
ANickerson/python-neo
Neo is a package for representing electrophysiology data in Python, together with support for reading a wide range of neurophysiology file formats
ANickerson/PyTorchWavelets
PyTorch implementation of the wavelet analysis found in Torrence and Compo (1998)
ANickerson/silver-train
ANickerson/sprint-reader-chrome
A speed reading Google Chrome extension (via Rapid Serial Visual Presentation).
ANickerson/varianttools
software tool for the manipulation, annotation, selection, and analysis of variants in the context of next-gen sequencing analysis
ANickerson/wdl
Workflow Description Language - Specification and Implementations
ANickerson/zk
A plain text note-taking assistant