Pinned Repositories
AOAutomontaging
Automontaging for AO images
ARFS
Input from ARFS to create batch files
Circularity_vs_Roundness_FAZ
Repository containing all scripts used in "The Shape of the Foveal Avascular Zone: When a Circle Isn't Round" by Grieshop et al.
Eye_Motion_Repair
Code that removes residual distortions due to eye motion from images and videos processed via strip or grid registration.
Metricks
A repository containing validated coordinate structure measurements. All of these metrics are designed for adaptive optics ophthalmoscope images.
OCT-Converter
Tools for extracting the raw optical coherence tomography (OCT) and fundus data from proprietary file formats.
OCT_Thickness_Extractor
Script to extract OCT layer thicknesses based on segmented OCT data.
OCT_Volume_Viewer
OCT Volume Viewer Application
Szpernal_etal_OCTA_RetinalVascMetrics
Repository containing all scripts used in "Assessing the Sensitivity of OCT-A Retinal Vasculature Metrics" by Szpernal et al.
uWFS
Handheld WFS code. Version Forked from WAIVS repo. Originally from the Jonnal lab (CHOIR).
AOIPLab's Repositories
AOIPLab/Metricks
A repository containing validated coordinate structure measurements. All of these metrics are designed for adaptive optics ophthalmoscope images.
AOIPLab/AOAutomontaging
Automontaging for AO images
AOIPLab/ARFS
Input from ARFS to create batch files
AOIPLab/Eye_Motion_Repair
Code that removes residual distortions due to eye motion from images and videos processed via strip or grid registration.
AOIPLab/OCT_Thickness_Extractor
Script to extract OCT layer thicknesses based on segmented OCT data.
AOIPLab/AO-PIPELINE
Adaptive optics scanning light ophthalmoscope image processing pipeline
AOIPLab/Circularity_vs_Roundness_FAZ
Repository containing all scripts used in "The Shape of the Foveal Avascular Zone: When a Circle Isn't Round" by Grieshop et al.
AOIPLab/File_Renaming
Matlab scripts to rename or mask files
AOIPLab/Full-Auto-Density-Mapping
A repository that implements a fully automated approach for estimating density, and spacing both in single images and in montages.
AOIPLab/Matfile_Generator
Creates .mat files to correspond to confocal videos. Used mainly for bin converted avis
AOIPLab/OCT-Converter
Tools for extracting the raw optical coherence tomography (OCT) and fundus data from proprietary file formats.
AOIPLab/OCT_Volume_Viewer
OCT Volume Viewer Application
AOIPLab/Szpernal_etal_OCTA_RetinalVascMetrics
Repository containing all scripts used in "Assessing the Sensitivity of OCT-A Retinal Vasculature Metrics" by Szpernal et al.
AOIPLab/uWFS
Handheld WFS code. Version Forked from WAIVS repo. Originally from the Jonnal lab (CHOIR).