Pinned Repositories
augur
Pipeline components for real-time phylodynamic analysis
auspice
Web app for visualizing pathogen evolution
btb-forestry
Build phylogenetic trees for specified M.bovis samples
btb-phylo
APHA software for finding pair-wise SNP distance between MBovis isolates.
bTB-reprocessing
Simple approach for processing accumulated sequence data
btb-seq
Nextflow script for processing WGS data
GenAPP
GenAPP (Genomics for Animal & Plant Pathogens) is a bioinformatics dashboard for GAPDC2.
sequence-manager
snp-validation
snp-validation
ViewBovis
This repository will be for source code of the ViewBovis app which is currently in development.
APHA-CSU's Repositories
APHA-CSU/ViewBovis
This repository will be for source code of the ViewBovis app which is currently in development.
APHA-CSU/btb-seq
Nextflow script for processing WGS data
APHA-CSU/btb-forestry
Build phylogenetic trees for specified M.bovis samples
APHA-CSU/augur
Pipeline components for real-time phylodynamic analysis
APHA-CSU/auspice
Web app for visualizing pathogen evolution
APHA-CSU/bioinformatics-user-development
Resources for BUD
APHA-CSU/btb-phylo
APHA software for finding pair-wise SNP distance between MBovis isolates.
APHA-CSU/bTB-reprocessing
Simple approach for processing accumulated sequence data
APHA-CSU/DataAnalysisService
APHA-CSU/GenAPP
GenAPP (Genomics for Animal & Plant Pathogens) is a bioinformatics dashboard for GAPDC2.
APHA-CSU/GenAPP-analysispipeline
APHA-CSU/sequence-manager
APHA-CSU/snp-validation
snp-validation
APHA-CSU/hello-nextflow
A minimal DSL2 nextflow example for processing fastq read pairs
APHA-CSU/hello-nextflow-AWSbatch
APHA-CSU/ViewBovis-stats