Abdul-Kader-Ibrahim

Pinned Repositories

bowtie2
A fast and sensitive gapped read aligner
Language:C++00
bwa
Burrow-Wheeler Aligner for short-read alignment (see minimap2 for long-read alignment)
Language:C00
freebayes
Bayesian haplotype-based genetic polymorphism discovery and genotyping.
Language:C++00
gatk
Official code repository for GATK versions 4 and up
Language:Java00
picard
A set of command line tools (in Java) for manipulating high-throughput sequencing (HTS) data and formats such as SAM/BAM/CRAM and VCF.
Language:Java00

Abdul-Kader-Ibrahim's Repositories

Abdul-Kader-Ibrahim/freebayes
Bayesian haplotype-based genetic polymorphism discovery and genotyping.
Abdul-Kader-Ibrahim/gatk
Official code repository for GATK versions 4 and up
Abdul-Kader-Ibrahim/picard
A set of command line tools (in Java) for manipulating high-throughput sequencing (HTS) data and formats such as SAM/BAM/CRAM and VCF.
Abdul-Kader-Ibrahim/bwa
Burrow-Wheeler Aligner for short-read alignment (see minimap2 for long-read alignment)
Abdul-Kader-Ibrahim/bowtie2
A fast and sensitive gapped read aligner