Accio
A Computational Biologist in Drug Discovery
F. Hoffmann-La Roche AG, SwitzerlandBasel, Switzerland
Pinned Repositories
2020-05-InstallAndRunLanguageTools
Installation and running of LanguageTools on a local machine
2024-02-PK-parameters-visualized
AMIDD
Introduction to Applied Mathematics and Informatics in Drug Discovery (AMIDD)
BioQC
Detect tissue heterogeneity in gene expression data with BioQC
BioQC-example
The BioQC algorithm applied to a real expression profiling dataset
causal_drug_discovery
Causal inference with Python and R
demo-linking-native
Demo of linking native routines in other packages in R
KEGGgraph
The KEGGgraph package to parse KEGG pathways in R into graph objects
MCBDD
Mathematical and Computational Biology in Drug Discovery
qiaseq-singlecell-rna
processing single cell QIAseq UPX RNA reads
Accio's Repositories
Accio/AMIDD
Introduction to Applied Mathematics and Informatics in Drug Discovery (AMIDD)
Accio/KEGGgraph
The KEGGgraph package to parse KEGG pathways in R into graph objects
Accio/BioQC
Detect tissue heterogeneity in gene expression data with BioQC
Accio/causal_drug_discovery
Causal inference with Python and R
Accio/MCBDD
Mathematical and Computational Biology in Drug Discovery
Accio/2024-02-PK-parameters-visualized
Accio/bactopia
A flexible pipeline for complete analysis of bacterial genomes
Accio/python-intermediate-inflammation
Python intermediate course: inflammation
Accio/2021-01-word-count
An instance of the word-count template provided by CodeRefinery
Accio/2023-06-Ben-Schnuppern
Accio/2023-07-collider
A simple example of collider's bias
Accio/2023-11-Zukunftstag-2023
Zukunftstag 2023
Accio/2024-01-GGG-PythonAtLibrary
Entwurf, Übungen, und Materielien für die Veranstaltung Python@Library im GGG Stadtbibliothek Basel, Januar 2024
Accio/2024-02-good-data-pay-compound-interests
A plot showing the point
Accio/2024-02-Roche-Schullabor-Experio
Accio/2024-03-From-Novel-Targets-To-Novel-Therapeutics
Lecture on mechanistic, statistical, and causal modelling in drug discovery for Master Program Drug Sciences
Accio/accio.github.io
Jitao David Zhang's blog
Accio/acciopy
A python package for matching lists of strings approximately
Accio/AMBER
Automated Modelling for Biological Evidence-based Research
Accio/blitzgsea
Fast GSEA implementation of the prerank algorithm. Use Loess interpolation of bimodal ES distribution for accurate p-value estimation.
Accio/causal_salad_2021
One day course on causal inference, MPI-EVA 9 September 2021
Accio/CV
CV
Accio/designit
Blocking and randomization for experimental design
Accio/distsysbook
The book Distributed systems: for fun and profit
Accio/dowhy
DoWhy is a Python library for causal inference that supports explicit modeling and testing of causal assumptions. DoWhy is based on a unified language for causal inference, combining causal graphical models and potential outcomes frameworks.
Accio/genetic_support
Refining the impact of genetic evidence on clinical success
Accio/hepatitisB
HBV build
Accio/learnpy
Scripts and notebooks to learn python
Accio/neuromatch-course-content
NMA Computational Neuroscience course
Accio/PMDA-summer-schoo-2022-Team-1-RanForrest
Team 1 (Amir, Antonio, Martina, and Selen)