/Matlab_Neurosynth

Runs meta-analysis on neurosynth database in Matlab

Primary LanguageMATLAB

Matlab_Neurosynth

Runs meta-analysis on neurosynth database in Matlab

.. work still in progress.

What it does: ###- Part 1 of the code generates a list of words; iterate by changing to words to be included and exluded(1) and pressing CMD+ENTER till you're satisfied with the 'FINAL LIST'(2)

napkin 03-02-17 4 39 00 pm

- Part 2 of the code does the following;

  • Searches the neurosynth features database for studies that 'load' (as defined by neurosynth) on those words

image

screen shot 2017-02-03 at 16 44 03

  • takes the voxels reported by those studies and plots them onto an empty brain by adding +1 every time that coordinate gets reported; for example if exact coordinate [42 -46 -22] get reported three times, it has value of 3; [42 -46 -23] get reported 1 time, it gets value of 1;
  • smooths result with kernel chosen.
  • exact file gets exported as meta.nii
  • smoothed file gets exported as smeta.nii

napkin 03-02-17 5 05 06 pm

##How to run: click for video Running the script

author_similarity.m

author_similarity.m

  • Generates a mean feature vector for each the authors
  • Runs a correlation matrix and a dendrogram

Like this: screen shot 2017-02-14 at 17 35 37