Ajay-Zou

Pinned Repositories

3D-designs
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3d_print_designs
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BCSIII
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BIRDS_plugin
BIRDS plug-in on Fiji and attached jar package
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buzcode
Code for internal lab sharing - polishing has started but is by no means complete
Language:MATLAB00
buzcoderough
Code for internal lab sharing - not necessarily polished or ready for sharing
Language:MATLAB00
CaImAn-MATLAB
Complete Matlab pipeline for large scale calcium imaging data analysis
Language:MATLAB00
Cell-Assembly-Detection
Matlab Toolbox for Neuronal Assembly Detection
Language:MATLAB00
CellExplorer
CellExplorer is a graphical user interface (GUI) and standardized pipeline for exploring and characterizing single cells acquired with extracellular electrodes
Language:MATLAB00
ChangValiante2018
4-AP Epileptiform Event Detector
Language:MATLAB00

Ajay-Zou's Repositories

Ajay-Zou/CaImAn-MATLAB
Complete Matlab pipeline for large scale calcium imaging data analysis
Ajay-Zou/Imaging-analysis
Codes for vagal ganglion imaging
Ajay-Zou/BIRDS_plugin
BIRDS plug-in on Fiji and attached jar package
Ajay-Zou/Kilosort-1
Fast spike sorting with drift correction for up to a thousand channels
Ajay-Zou/ChangValiante2018
4-AP Epileptiform Event Detector
Ajay-Zou/SpikeGadgets_OpenEphys_Drive
A tetrode hyper drive adapted from open ephys to work with spikegadgets
Ajay-Zou/replay_trajectory_classification
Identify whether replays are fragmented, continuous, or stationary.
Ajay-Zou/CellExplorer
CellExplorer is a graphical user interface (GUI) and standardized pipeline for exploring and characterizing single cells acquired with extracellular electrodes
Ajay-Zou/spectral_connectivity
Frequency domain functional and directed connectivity analysis tools for electrophysiological data
Ajay-Zou/buzcode
Code for internal lab sharing - polishing has started but is by no means complete
Ajay-Zou/fiji
A "batteries-included" distribution of ImageJ :battery:
Ajay-Zou/phy2-plugins
Plugins for Phy2
Ajay-Zou/ripple_detection
Tools for identifying sharp wave ripple events using LFPs
Ajay-Zou/video_behavior_tracking
Python package to track position, velocity, head direction from video for Loren Frank datasets
Ajay-Zou/ClearMap2
ClearMap 2.0 with WobblyStitcher, TubeMap and CellMap
Ajay-Zou/phy
phy: interactive visualization and manual spike sorting of large-scale ephys data
Ajay-Zou/shuttle-drive
Next gen, tetrode drive implant
Ajay-Zou/replay_classification
State space models for categorization of replay content from multiunit spiking activity. Deng et al. 2016
Ajay-Zou/wheelAnalysis
Ajay-Zou/MClust-Spike-Sorting-Toolbox
MClust is a Matlab-based spike sorting toolbox for the separation of putative cells from multi-site neurophysiological recordings. It is particularly good for tetrodes.
Ajay-Zou/ColginLabCode
Hosting Site for Code Used by the Colgin Lab
Ajay-Zou/KilosortWrapper
Ajay-Zou/Cell-Assembly-Detection
Matlab Toolbox for Neuronal Assembly Detection
Ajay-Zou/Phase-Locking-Value---Modulation-Index
Matlab routines to assess the modulation of the phase synchronization of faster oscillations by the phase of slower rhythms, as described in Gonzalez et al. (2020).
Ajay-Zou/mmmGUI
"mouse movie manager" and GUI
Ajay-Zou/ManyFoodZ
Ajay-Zou/KiloSort
GPU code for spike sorting
Ajay-Zou/GLM-CFC
A GLM based approach to measure CFC
Ajay-Zou/flexDrive
Compact hyperdrive for up to 16 independently movable electrodes
Ajay-Zou/klustakwik2
Fast software for high-dimensional cluster analysis using the masked EM algorithm for Gaussians mixtures