/echoconda

echoverse module: conda environment handling

Primary LanguageR



R build status License: GPL (>= 3)

Author: Brian M. Schilder
README updated: Mar-10-2022

echoconda: Various utility functions to find, build, and use conda environments from within R.

This R package is part of the echoverse suite that supports echolocatoR: an automated genomic fine-mapping pipeline.

If you use echoconda, please cite:

Brian M Schilder, Jack Humphrey, Towfique Raj (2021) echolocatoR: an automated end-to-end statistical and functional genomic fine-mapping pipeline, Bioinformatics; btab658, https://doi.org/10.1093/bioinformatics/btab658

Installation

if(!require("remotes")) install.packages("remotes")

remotes::install_github("RajLabMSSM/echoconda")
library(echoconda)

Documentation

Website

Getting started

Contact

Brian M. Schilder, Bioinformatician II
Raj Lab
Department of Neuroscience, Icahn School of Medicine at Mount Sinai