AlinaKurjan

University of OxfordOxford

Pinned Repositories

Conda_Workshops
This repository contains documentation relating to how to use conda for installing bioinformatic software, creating new enviroments when you have conflicting dependences and how to use conda for reproducible research
Language:Shell00
DPhilCode
Collection of scripts used for data analysis for my DPhil project
Language:HTML10
hamstring_atlas
This is the repo that contains code for the hamstring paper
Language:Jupyter Notebook00
jekyll-serif-theme
Serif is a multi page business theme for Jekyll.
Language:SCSS00
scflow
Single cell pipelines
Language:Jupyter Notebook00
scib-pipeline
Snakemake pipeline that works with the scIB package to benchmark data integration methods.
Language:Python00
template
A beautiful, simple, clean, and responsive Jekyll theme for academics
Language:JavaScript00
scflow
Single cell pipelines
Language:Jupyter Notebook16 2 156
scgen
Single cell perturbation prediction
Language:Python277 9 8056
single-cell-best-practices
https://www.sc-best-practices.org
Language:Jupyter Notebook804 19 194192

AlinaKurjan/DPhilCode
Collection of scripts used for data analysis for my DPhil project
Language:HTML10
AlinaKurjan/Conda_Workshops
This repository contains documentation relating to how to use conda for installing bioinformatic software, creating new enviroments when you have conflicting dependences and how to use conda for reproducible research
Language:Shell00
AlinaKurjan/hamstring_atlas
This is the repo that contains code for the hamstring paper
Language:Jupyter Notebook00
AlinaKurjan/jekyll-serif-theme
Serif is a multi page business theme for Jekyll.
Language:SCSS00
AlinaKurjan/scflow
Single cell pipelines
Language:Jupyter Notebook00
AlinaKurjan/scib-pipeline
Snakemake pipeline that works with the scIB package to benchmark data integration methods.
Language:Python00
AlinaKurjan/template
A beautiful, simple, clean, and responsive Jekyll theme for academics
Language:JavaScript00