Issues
- 1
Serotiny workflow integration: Reimplement some of the notebooks in serotiny
#91 opened by ritvikvasan - 0
No matching distribution for lkaccess
#99 opened by antoineruzette - 0
inplace operation Runtime Failure
#95 opened by JPFrancis - 0
merge actk dp etc into master
#92 opened by donovanr - 0
New results: Analyze latent space of the segmentation models for the variance, and mito datasets
#90 opened by ritvikvasan - 0
Documentation: Args file and its contents
#89 opened by ritvikvasan - 0
Notebook example: Pass a single image through a trained model (ref and structure), get latent vector, generate structure
#88 opened by ritvikvasan - 0
Notebook example: Generate multiple structures from a trained model into a single cell shape
#87 opened by ritvikvasan - 0
- 0
- 0
fix model diagram image
#83 opened by donovanr - 2
Results: Figure 5
#74 opened by donovanr - 2
Discussion: Loss function
#77 opened by donovanr - 0
Results: Content related to Fig. 2
#64 opened by donovanr - 3
Discussion: vanilla is ok
#79 opened by donovanr - 0
PlosCompBiol submission guidelines
#82 opened by tknijnen - 1
Results: Figure 3
#66 opened by donovanr - 1
Results: Content related to Fig. 3
#67 opened by donovanr - 1
Discussion: β-VAE vs GAN
#76 opened by donovanr - 0
Results: talk up good organelle distributions
#65 opened by donovanr - 1
Results: Content related to Fig. 5
#75 opened by donovanr - 1
Results: Figure 2
#63 opened by donovanr - 1
Results: Table 1
#62 opened by donovanr - 1
Intro: Finesse raw vs segmented images
#60 opened by donovanr - 0
Intro: contribution specificity
#59 opened by donovanr - 0
- 0
logistics: Add authors to manuscript
#81 opened by donovanr - 0
Intro: citations
#58 opened by donovanr - 1
Results: Figure 1
#61 opened by donovanr - 0
- 1
Code: Error during 'pip install'
#56 opened by Calebium - 0
- 0
Results: Content related to Fig. 4b
#73 opened by donovanr - 0
Results: Content related to Fig. 4
#72 opened by donovanr - 0
Results: Figure 4
#71 opened by donovanr - 0
Results: latent space truncation
#70 opened by donovanr - 0
- 0
Update precision_recall to pass in multiple k-values for computational efficiency
#34 opened by gregjohnso - 0
Slice pictures
#20 opened by donovanr - 0
save/load RNG state
#21 opened by gregjohnso - 0
Add SSIM as a metric for variation evaluation
#22 opened by gregjohnso - 0
roll 'model_utils' into 'utils'
#26 opened by gregjohnso - 0
Feature Calcs
#18 opened by donovanr - 0
Make a Movie
#19 opened by donovanr - 1
Add contributing agreement markdown from AI
#57 opened by Kimcmetzler - 0
Cyclic annealing for VAA
#52 opened by gregjohnso - 0
conda can't build environment on refactor2
#28 opened by gajomi - 0
Compute reconstruction error per cell
#17 opened by donovanr - 0
Update README
#33 opened by gregjohnso - 0
output logs should contain relative paths
#23 opened by gregjohnso