Raw expression matrix from Weinreb et al., 2020

[Beiusxzw]

Hi, I really appreciate the processed data from Weinreb et al., 2020 in thie repo. I would like to ask if I can access the Raw countt expression matrix for the In vitro and In vivo differentiation experiment? Thanks!

[calebweinreb]

Unfortunately the raw counts are not available but you can recover them easily from the normalized counts. During normalization each cell was uniformly scaled by a common factor. You can recover this factor by taking the reciprocal of the smallest non-zero gene-expression value for that cell. You should then be able to rescale each cell such that all the gene expression values are integers.

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[Beiusxzw]

Thanks for your reply!