Pinned Repositories
antibody-in-pytorch
Machine learning models for antibody sequences in PyTorch
applied-computational-genomics
Applied Computational Genomics Course at UU: Spring 2020
biopandas
Working with molecular structures in pandas DataFrames
cs-video-courses
List of Computer Science courses with video lectures.
deep-learning-with-python-notebooks
Jupyter notebooks for the code samples of the book "Deep Learning with Python"
dlab-public
Code for the paper "DLAB - Deep learning methods for structure-basedvirtual screening of antibodies"
machine-learning-snippets
Python Machine Learning Snippets contains various machine learning examples as Jupyter notebooks with scikit-learn, statsmodel, numpy and other libraries.
matplotlib
matplotlib: plotting with Python
neutcurve
Fit and plot neutralization curves
thunor-web-quickstart
Quickstart configuration for Thunor Web
Ammounaliza's Repositories
Ammounaliza/antibody-in-pytorch
Machine learning models for antibody sequences in PyTorch
Ammounaliza/applied-computational-genomics
Applied Computational Genomics Course at UU: Spring 2020
Ammounaliza/biopandas
Working with molecular structures in pandas DataFrames
Ammounaliza/cs-video-courses
List of Computer Science courses with video lectures.
Ammounaliza/deep-learning-with-python-notebooks
Jupyter notebooks for the code samples of the book "Deep Learning with Python"
Ammounaliza/dlab-public
Code for the paper "DLAB - Deep learning methods for structure-basedvirtual screening of antibodies"
Ammounaliza/machine-learning-snippets
Python Machine Learning Snippets contains various machine learning examples as Jupyter notebooks with scikit-learn, statsmodel, numpy and other libraries.
Ammounaliza/matplotlib
matplotlib: plotting with Python
Ammounaliza/neutcurve
Fit and plot neutralization curves
Ammounaliza/papers_for_protein_design_using_DL
List of papers about Proteins Design using Deep Learning
Ammounaliza/Webscraping-ClinicalTrials.gov
Extracting Inclusion/Exclusion criteria and other information from clinicaltrials.gov
Ammounaliza/thunor-web-quickstart
Quickstart configuration for Thunor Web
Ammounaliza/2306-Wolinski-Chaining
Ammounaliza/amazon-sagemaker-protein-classification
Implementation of Protein Classification based on subcellular localization using ProtBert(Rostlab/prot_bert_bfd_localization) model from Hugging Face library, based on BERT model trained on large corpus of protein sequences.
Ammounaliza/Ammounaliza
Config files for my GitHub profile.
Ammounaliza/beam
Apache Beam is a unified programming model for Batch and Streaming
Ammounaliza/biotite
A comprehensive library for computational molecular biology
Ammounaliza/bnc
Data scraper for the Brave New Coin API
Ammounaliza/chembl_webresource_client
Official Python client for accessing ChEMBL API.
Ammounaliza/gcp_poo_study
Ammounaliza/getting-started
Getting started with Docker
Ammounaliza/how-to-python
basic Python scripts for data visualization
Ammounaliza/ncbi-acess
Ammounaliza/picard
A set of command line tools (in Java) for manipulating high-throughput sequencing (HTS) data and formats such as SAM/BAM/CRAM and VCF.
Ammounaliza/PlantsAndPython
Ammounaliza/pygments
Pygments is a generic syntax highlighter written in Python
Ammounaliza/pynanomapper
A Python client for the eNanoMapper API
Ammounaliza/simplydrug
Drug Discovery Data Analysis
Ammounaliza/StarGazer
StarGazer is a tool designed for rapidly assessing drug repositioning opportunities. It combines multi-source, multi-omics data with a novel target prioritization scoring system in an interactive Python-based Streamlit dashboard. StarGazer displays target prioritization scores for genes associated with 1844 phenotypic traits.
Ammounaliza/training-collection
Collection of bioinformatics training materials