Andy-B-123

AGI_demo

AnnotationCheckerWithStructure

Developing a workflow to assess annotation correctness with structure information.

aTRAM

datashare_repo

Upload data for sharing

g-d_algorithm

gLM

Genomic language model predicts protein co-regulation and function

LittleScripts

MetaeukToGff3

Repository for the Python helper script to convert the Metaeuk output to a gff3 compatible file.

PhDChapter_PoolSeq

Contains the R Markdown and data file for my PoolSeq chapter

TargetSiteDuplicationFinder

A repository for a parsing script to identify mobile element insertions characterised by Target Site Duplications from short-read alignment files

Andy-B-123/TargetSiteDuplicationFinder

A repository for a parsing script to identify mobile element insertions characterised by Target Site Duplications from short-read alignment files

Andy-B-123/AnnotationSplitter

Filtering workflow for identifying mis-annotations in genome annotations using a trusted protein dataset and Helixer

Andy-B-123/MetaeukToGff3

Repository for the Python helper script to convert the Metaeuk output to a gff3 compatible file.

Andy-B-123/AGI_demo

Andy-B-123/AnnotationCheckerWithStructure

Developing a workflow to assess annotation correctness with structure information.

Andy-B-123/aTRAM

Andy-B-123/datashare_repo

Upload data for sharing

Andy-B-123/g-d_algorithm

Andy-B-123/gLM

Genomic language model predicts protein co-regulation and function

Andy-B-123/LittleScripts

Andy-B-123/PhDChapter_PoolSeq

Contains the R Markdown and data file for my PoolSeq chapter

Andy-B-123/PythonInstallationTestBioinfo

Temp repo to understand python script setup

Andy-B-123/RealSimplePangenomics

Analysis script for reference-based pangenome analysis

Andy-B-123/SRAssembler

Selective and Recursive local Assembler

Andy-B-123/theme_park

Fun ggplot themes for popular culture