Angione Lab

12-machine-learning-models-for-text-classification

GEM-Chromohalobacter-canadensis-85B

Genome-scale metabolic model of Chromohalobacter canadensis 85B

Halomonas-elongata-Metabolic-Modelling

Genome-scale metabolic modelling derived flux analysis in Halomonas elongata 153B explains polyhydroxyalkanoates and ectoine biosynthesis

metabolic_modelling_website

Multi-objective-optimization-of-gut-community-metabolic-model

multiOmicMechanismAwareML

NSCLC-Survival-Prediction-models

survival_analysis_tutorial

Synechococcus7002-metabolic-modelling

Bi-level regularized flux balance analysis of Synechococcus spp. PCC 7002

Tutorials_Combining_ML_and_GSMM

Angione-Lab/12-machine-learning-models-for-text-classification

Angione-Lab/Tutorials_Combining_ML_and_GSMM

Angione-Lab/Halomonas-elongata-Metabolic-Modelling

Genome-scale metabolic modelling derived flux analysis in Halomonas elongata 153B explains polyhydroxyalkanoates and ectoine biosynthesis

Angione-Lab/Synechococcus7002-metabolic-modelling

Bi-level regularized flux balance analysis of Synechococcus spp. PCC 7002

Angione-Lab/survival_analysis_tutorial

Angione-Lab/Hepatoblastoma-Children-Classification

Angione-Lab/Multi-objective-optimization-of-gut-community-metabolic-model

Angione-Lab/multiOmicMechanismAwareML

Angione-Lab/NSCLC-Survival-Prediction-models

Angione-Lab/Benchmarking-ML-and-Cox-for-lung-cancer

Benchmarking machine learning and Cox regression approaches for lung cancer on combined RNA-seq and metabolic modelling

Angione-Lab/Emulating-ABMs-with-ML

Mathematica notebooks and results for our paper on emulating agent-based models with ML

Angione-Lab/GEM-Chromohalobacter-canadensis-85B

Genome-scale metabolic model of Chromohalobacter canadensis 85B

Angione-Lab/GEMsplice

Angione-Lab/HybridGroupIPFLasso_pc2Lasso

Angione-Lab/MatLab_course

Documents regarding the Claudio Angioni MatLab course

Angione-Lab/metabolic_modelling_website

Angione-Lab/Multi-omic_ML_risk_prediction_breast_cancer

Angione-Lab/PGA_and_C-EDGE

Code for the paper: "Discovering code Essential Multiple Gene Effects through Large Scale Optimization: an Application to Human Cancer Metabolism"

Angione-Lab/Predicting-gut-microbial-behavior-in-human-diseases-via-community-metabolic-modeling-and-ML

Combining Pairwise Modelling and Machine Learning

Angione-Lab/Tools-for-GEM-reconstruction-and-analysis-

Angione-Lab/Fusing-imaging-and-metabolic-modelling-via-deep-learning

Integrated framework for fusing radiogenomics and metabolic modelling via deep learning in ovarian cancer

Angione-Lab/Metabolic-modelling-of-SARS-CoV-2-in-cancer-cells

Genome-scale metabolic modelling of SARS-CoV-2 infection in cancer cells

Angione-Lab/NK-A-17E-233I-DHODH-Inhibitor-for-the-Treatment-of-Colorectal-Cancer

NK-A 17E-233I, a Natural Small Molecule Human Dihydroorotate Dehydrogenase (DHODH) Inhibitor for the Treatment of Colorectal Cancer

Angione-Lab/TAP_TU_SyntheticModelGenerator

Generate Synthetic models used in KTP Paper