Pinned Repositories
.github
Learn more about the work we do
bovine-assembly
bovine assembly central repo
bovine-graphs
Integrate multiple genome assemblies into a pangenome graph
euler_profiles
Snakemake profile for running jobs on an LSF cluster
Low_pass_imputation
Repository including scripts and workflows for "Size and composition of haplotype reference panels impact the accuracy of imputation from low-pass sequencing in cattle"
pangenome_KIT
pangenome_molQTL
Reference_assembly_choice
Repository including scripts and workflows for "Investigating the impact of reference assembly choice on genomic analyses in a cattle breed"
RNA_variant_calling
Calling variants from DNA- and RNA-seq
superpangenome_construction
ETH Animal Genomics group's Repositories
AnimalGenomicsETH/bovine-graphs
Integrate multiple genome assemblies into a pangenome graph
AnimalGenomicsETH/superpangenome_construction
AnimalGenomicsETH/bovine-assembly
bovine assembly central repo
AnimalGenomicsETH/pangenome_molQTL
AnimalGenomicsETH/Low_pass_imputation
Repository including scripts and workflows for "Size and composition of haplotype reference panels impact the accuracy of imputation from low-pass sequencing in cattle"
AnimalGenomicsETH/pangenome_KIT
AnimalGenomicsETH/Reference_assembly_choice
Repository including scripts and workflows for "Investigating the impact of reference assembly choice on genomic analyses in a cattle breed"
AnimalGenomicsETH/RNA_variant_calling
Calling variants from DNA- and RNA-seq
AnimalGenomicsETH/.github
Learn more about the work we do
AnimalGenomicsETH/BSW_analysis
AnimalGenomicsETH/euler_profiles
Snakemake profile for running jobs on an LSF cluster